Pairwise Alignments

Query, 303 a.a., protein-export membrane protein, SecD/SecF family from Pseudomonas stutzeri RCH2

Subject, 294 a.a., preprotein translocase subunit SecF (RefSeq) from Shewanella sp. ANA-3

 Score =  196 bits (497), Expect = 7e-55
 Identities = 117/282 (41%), Positives = 167/282 (59%), Gaps = 4/282 (1%)

Query: 5   INFMGVRHVAFALTVLLTVASLASLVVKGLNFGLDFTGGTLIELGYERPVELEQVRGQLV 64
           IN    R+V+ A+++ L +ASL  + +KG N+GLDFTGG + E+  +R +   +++  L+
Sbjct: 4   INLTKWRYVSSAISIFLMLASLTIIGMKGFNWGLDFTGGVVTEVQLDRRITSSELQ-PLL 62

Query: 65  QAGFADAVVQSFGATTDVLVRMPGDDPQLGERVASALRNADSGNSVSVKRVEFVGPAVGE 124
            A +   V     +     V    D  Q    +A  L        V V     VGP VG+
Sbjct: 63  NAAYQQEVTVISASEPGRWVLRYADTAQSNVDIAQTLAPL---GEVQVLNTSIVGPQVGK 119

Query: 125 ELRDQGGLGMLLALGGILVYVAFRFQWKFGLGAVLSLFHDVILVLGVFSFFQISFDLTVL 184
           EL +QGGL +L+A+  IL Y+++RF+W+   GA+ +L HDVI VL  FS  Q+ F+LTVL
Sbjct: 120 ELAEQGGLALLVAMLCILGYLSYRFEWRLASGALFALVHDVIFVLAFFSLTQMEFNLTVL 179

Query: 185 AAVLAVIGYSLNDTIVIFDRIRENFRMLRKAELLENINISTTQTLLRTVATSVSTLLAVG 244
           AAVLA++GYSLND+I+I DRIRE      K  + E  N +   T  RT+ TS +TL+ VG
Sbjct: 180 AAVLAILGYSLNDSIIIADRIRELLIAKPKLAIQEINNQAIVATFSRTMVTSGTTLMTVG 239

Query: 245 ALMVFGGENLWGFSLALLIGVGAGTYSSVYVAGMLLVWLKLT 286
           AL + GG  L GFS+A+ IG+  GT+SS+ V   L  +L LT
Sbjct: 240 ALWIMGGGPLEGFSIAMFIGILTGTFSSISVGTSLPEFLGLT 281