Pairwise Alignments

Query, 335 a.a., Nucleoid-associated protein from Pseudomonas stutzeri RCH2

Subject, 333 a.a., nucleoid-associated protein from Vibrio cholerae E7946 ATCC 55056

 Score =  201 bits (511), Expect = 2e-56
 Identities = 108/331 (32%), Positives = 185/331 (55%), Gaps = 5/331 (1%)

Query: 3   IRHCIVHLIEKKPDGTPAVLHARDSELGNSQAIENLLADLNESYNAKQGKAWGFFHEESG 62
           + + I+H + K  D    V++ R   L N  + ENL+A+L+  +NAK GK +G F  +S 
Sbjct: 5   LSNVILHQLRKN-DNDELVVNYRAESLRNDTSTENLVAELHRVFNAKAGKGFGCFKSDS- 62

Query: 63  AYPFSGWLAQYMEGNQDFTAFSRQAVEHLQKLMEESNLSTGGHVLFAHYQQGMTDYLAIA 122
              F  WL +   G   F  FS+Q+ + L+  + +   +  G ++ A YQ   TDYL I 
Sbjct: 63  --EFQLWLQEMRRGTLPFYEFSQQSAQRLKNELAKYPFADEGILVMAEYQSLATDYLFIG 120

Query: 123 LLHHSNGVTVTDSLDVTEARHLDLGQLHLATRINISEWQNNKQSKQYISFIKGKNGKKVS 182
           LL  +  + VT+ LD++   +LD+ ++ +  RI++S ++ +K+SK+Y+S+IKG+ G+KV+
Sbjct: 121 LLPLNQSLKVTEGLDISATDYLDINKMDIVARIDLSSYETDKESKRYLSYIKGRVGRKVA 180

Query: 183 EYFRDFIGCQEGVDGPGETRTLLKAFSDYVESEDLPEEKAREKTSALVGYASSQAKIGEP 242
           ++F DF+    G+D   + + L++A  D+       +E+       +  Y + Q K G+ 
Sbjct: 181 DFFLDFLQADIGLDTKQQNQVLMQAVEDFCADAKFEKEEVISYKKQVYEYCNDQIKAGDE 240

Query: 243 MSLEELSGVIDEENPRA-FYEHIRNKDYGLSPEIPADKRTLNQFQRFTGRAEGLSISFES 301
           + ++ELSG +   N    F++  R + Y L    PAD+ T+ +  ++ G   GL++SF+S
Sbjct: 241 VRVQELSGELPPSNEGVNFFDFTREQGYQLEESFPADRSTVRKLTKYVGAGGGLNLSFDS 300

Query: 302 HLLGSKVEYDEARDMLIIRQLPTQLKDQLKR 332
            LLG +V YD   D L I+  P  L+DQL R
Sbjct: 301 LLLGERVFYDPETDTLTIKGTPPNLRDQLTR 331