Pairwise Alignments

Query, 540 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  222 bits (565), Expect = 3e-62
 Identities = 146/463 (31%), Positives = 255/463 (55%), Gaps = 23/463 (4%)

Query: 78  DSRNRYWSQFEGQEAKVQKILGDL---LVLTADEPELAKQIESLRSEHRTL--------- 125
           + RN + ++      +VQ  L  +      + D P + + IE   +E + +         
Sbjct: 98  ERRNNFIAELREGLTEVQSALSSIEQDAQFSRDVPVVKQSIEIYVAESQKMVALFNRLDQ 157

Query: 126 GVAYRKGLDAYIAADSDPLAGDAAVAGIDRATSAQLSELVKQLGDAAVQRSETIRADAQS 185
           G+A R+  + +I +  +   G+  ++ I+      LS+ V      ++++S    A + +
Sbjct: 158 GLATREEANVFIQSFRE--TGNRMISAIN-----DLSQKVNHYATTSMEQS----AQSNA 206

Query: 186 TASLGPLIMILASVVVALFSLWLVNRRIIEPIRSLIEHIARLSQGKFADRVDASRADELG 245
                 +I +L+ +++++ + WL++ +I+ PI SL   + +L+QG  + + DA   +E+ 
Sbjct: 207 VVMRNAMITVLSVLMLSVLAAWLLSGQIVAPINSLQSVMRKLAQGDLSVKADADGENEIA 266

Query: 246 RLAVAANVLRDFLADTFTRLQQSTSNLDSASGELSAIARLMADGTREQFSRTDQVATAMH 305
           +L+   N     L  T  +L + +  + SAS EL+A+        + +    +QVA+A++
Sbjct: 267 KLSQDVNTTVTQLYTTVEQLTRISEEVASASTELAAVMTQAESNAQMELMEIEQVASAVN 326

Query: 306 EMSATAQEVSRHAAEAAQAADAADHSAQQGEAVMRATIATITDVSGEIASTAEVIRRLEG 365
           E+++TA  VS +A+ A   A  AD  A+ G A+ + +      ++  +   A V+ RL+ 
Sbjct: 327 ELASTADNVSDNASSADATAREADELAKSGLAIFKESSQASEQMALALNDAARVVLRLKE 386

Query: 366 DSGRIGKVLEVIRGIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRTLAQRTAESTAE 425
            S +I  V+EVIRG++DQTNLLALNAAIEAARAG++GRGFAVVADEVR LA RT  ST E
Sbjct: 387 QSEQISNVIEVIRGVSDQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQASTKE 446

Query: 426 IHQIIDTVQTGASNAVRAIESGQARSEQGVGQVTEAGLMLQRITEAVEAIRDMNRQIATA 485
           I  II+ +QT ++ A  ++++      Q      +A   L  ITE+V  I D N Q+ATA
Sbjct: 447 IQAIIEELQTQSTMANDSMQTSLDMLTQNKALTAKANDALIGITESVSDINDSNAQVATA 506

Query: 486 AEEQTAVAEDISRNITEITSIATINQQNVERTETASQNLHGLS 528
           AE+Q+ V +DI+RN++ ++++   N   + ++ +AS  L  L+
Sbjct: 507 AEQQSHVTQDINRNVSNMSTLVHQNVTGISQSASASNELSHLA 549