Pairwise Alignments

Query, 540 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  255 bits (651), Expect = 4e-72
 Identities = 176/515 (34%), Positives = 275/515 (53%), Gaps = 23/515 (4%)

Query: 25  ALACIRLLSSNIDNFQALLDGPLEELQLVDEANLEFKVQVQEWKNVLLRGKQPDSRNRYW 84
           +LA    L + + N         E+ +LV +A  + ++   E     +RG   ++     
Sbjct: 144 SLAVFEQLVTEVRNMDPADANRFEQYRLVTDAKDDLRLARYE-----VRGYTTNATP--- 195

Query: 85  SQFEGQEAKVQKILGDLLVLTADEPELA-KQIESLRSEHRTLGVAYRKGLDAYIAADSDP 143
              E ++A V K+   +  L A +   +  Q + LR    +L +AYR  L  + AA    
Sbjct: 196 ---ETEQAAVSKLDSAIKDLDALKTTFSGTQADQLRQLETSL-MAYRTTLQNFKAA---- 247

Query: 144 LAGDAAVAGIDRATSAQ-LSELVKQLGDAAVQRSETIRADAQSTASLGPLIMILASVVVA 202
             G    A  +  T  Q + ++ + +    + R +   A A++T     L+ I+  ++ A
Sbjct: 248 -TGTIVQARKEMTTQGQDIVKISEDMYKLQLDRRDQESAQARTTQITCTLLAIILGIIAA 306

Query: 203 LFSLWLVNRRIIEPIRSLIEHIARLSQGKFADRVDASRADELGRLAVAANVLRDFLADTF 262
           +    ++ R+I  P+R  +  + R++ G     +  +R+DELG L      +   L +  
Sbjct: 307 V----IITRQITRPLRETLAVVDRIASGDLTQTLAVTRSDELGVLQQGIQRMGTTLRELI 362

Query: 263 TRLQQSTSNLDSASGELSAIARLMADGTREQFSRTDQVATAMHEMSATAQEVSRHAAEAA 322
             ++ S   + SA+ ELSA+    + G   Q   TDQVATAMHEMSAT  EV+R+A +A+
Sbjct: 363 GGIRDSVVQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHEMSATVAEVARNAEQAS 422

Query: 323 QAADAADHSAQQGEAVMRATIATITDVSGEIASTAEVIRRLEGDSGRIGKVLEVIRGIAD 382
           QAA  AD  A+ G+ V+   IA I  ++ E+  + + +  LE +S +IGKV++VI+ +A+
Sbjct: 423 QAASNADREARDGDKVVGEAIAQIERLANEVGRSVDAMTELEQESDKIGKVMDVIKAVAE 482

Query: 383 QTNLLALNAAIEAARAGDAGRGFAVVADEVRTLAQRTAESTAEIHQIIDTVQTGASNAVR 442
           QTNLLALNAAIEAARAG+AGRGFAVVADEVR LAQRT +ST EI  ++  +Q+G      
Sbjct: 483 QTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQQSTVEIETLVAALQSGTRQVSS 542

Query: 443 AIESGQARSEQGVGQVTEAGLMLQRITEAVEAIRDMNRQIATAAEEQTAVAEDISRNITE 502
            + + +  +   V    +AG  L  IT+ V +I+ MN+QIA AAEEQ+AVAE+ISR+I  
Sbjct: 543 IMLNSRELTVSSVTLSRQAGTSLGSITQTVSSIQAMNQQIAAAAEEQSAVAEEISRSIVN 602

Query: 503 ITSIATINQQNVERTETASQNLHGLSAQLTEVTQR 537
           +  ++       E T  +S  L  L  QL  +  R
Sbjct: 603 VRDVSEQTASASEETAASSVELARLGGQLQTMVSR 637