Pairwise Alignments

Query, 274 a.a., Small-conductance mechanosensitive channel from Pseudomonas stutzeri RCH2

Subject, 285 a.a., mechanosensitive ion channel protein MscS from Klebsiella michiganensis M5al

 Score =  216 bits (550), Expect = 4e-61
 Identities = 116/277 (41%), Positives = 173/277 (62%), Gaps = 5/277 (1%)

Query: 2   DLSVDYLVDLSESWL----PVVLQYGAQVTLALLTFLFGWWLINTLTAKVSSLLQRRQVD 57
           DL+V   ++ + SWL     ++L Y   +  AL   + G  +   ++  V+ L++ R +D
Sbjct: 3   DLNVVDSINNAGSWLVRNQALLLSYAVNIVAALAIIIVGLIVARIVSNTVNRLMRARHID 62

Query: 58  PTLHGFIGSLASVVLKVLLLVSVASMIGVETTSFIAVIGAAGLAIGLALQGSLANFAGGV 117
            T+  F+ +L    +    L++    +GV+T S IAV+GAAGLA+GLALQGSL+N A GV
Sbjct: 63  ATVADFLSALVRYAVIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGV 122

Query: 118 LILLFRPFRVGEWIEAQGIAGTVNSIQIFHTVLKTGDNKTVVVPNGALSNGHITNFSREP 177
           L+++FRPFR GE+++  GIAGTV ++QIF T L++ D K VVVPNG +  G+I NFSREP
Sbjct: 123 LLVVFRPFRAGEYVDLGGIAGTVLNVQIFSTTLRSADGKIVVVPNGKIIAGNIINFSREP 182

Query: 178 RRRADINIGIDYSSDIKLARQVLLEIAE-DPRVLREPEPVVFVTGLGDSSVNLSLRVWVA 236
            RR +  IG+ Y +DI   +Q+L  I E D R+L++ E  V +  LG SSVN  +RVW  
Sbjct: 183 VRRNEFIIGVAYDADIDKVKQLLTNIIESDERILKDREMTVRLNELGASSVNYVVRVWSK 242

Query: 237 TADFWPVTFSFTEQAKERLTAVGVGIPFPQRVVHLVQ 273
           ++D   V +   E+ K    A G+G P+PQ  VH+++
Sbjct: 243 SSDLQSVYWDVLERIKRDFDANGIGFPYPQMDVHVIR 279