Pairwise Alignments

Query, 671 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

Subject, 1013 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  142 bits (359), Expect = 6e-38
 Identities = 107/291 (36%), Positives = 149/291 (51%), Gaps = 32/291 (10%)

Query: 394  ITQRI-NMEEMMVQSEKMLSVGSLAAGMAHEINNPLGAILHNAQNIRRRLSP--ELERNR 450
            + QR+   +  ++QSEKM S+G LAAG+AHE+NNP+G +  N   +   L     +    
Sbjct: 728  LNQRLAEAQSQLLQSEKMASIGQLAAGVAHEMNNPIGFVYSNLGTLDHYLREIFAIIAAY 787

Query: 451  EAAEETGVR----LEAVNQY-------LQRREVPQLLDGIQQAGSRAAKIVSHMLSFSRM 499
            EAA+    R    LE+  Q          R ++ QLL   +    R AKI   +  FSR 
Sbjct: 788  EAADSGPCRDCRQLESARQLKLEKDFDFLRSDIVQLLAESRDGLERVAKIARDLKDFSRA 847

Query: 500  --SNRQLADCHLPVLIDQALEIAGNDFALMEGFDFKAIDIVRDFDPRVDRVPCIGNELEQ 557
              +  Q AD H    +D  L I  N+         K    V      +  V C  +++ Q
Sbjct: 848  GEAESQWADLHQG--LDSTLNIVWNEL--------KYKCTVHKEYGELPLVWCEPSQINQ 897

Query: 558  VLLNLLKNAAQAIHAHQVGEPGQIILRTRLNPPWAEIQVEDNGGGIPENVRKRIFEPFFT 617
            V +NLL NAAQAI      + G I LRT        + V D+G GI      R+FEPFFT
Sbjct: 898  VFMNLLVNAAQAIP-----KKGDIWLRTGRRGDEVFVAVSDSGCGIAPEYLHRLFEPFFT 952

Query: 618  TKEVGQGTGLGLSVSYFIITNNHQGQMEVQCQPGHGTTFTLRLPLNSPAEP 668
            TK VG+GTGLGLS++Y I+   HQG++EV+ +PG G+TFT+ LP+ +   P
Sbjct: 953  TKPVGKGTGLGLSLAYSIV-QKHQGRLEVESEPGRGSTFTVWLPIEARPRP 1002