Pairwise Alignments

Query, 671 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

Subject, 457 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  123 bits (309), Expect = 2e-32
 Identities = 89/279 (31%), Positives = 138/279 (49%), Gaps = 31/279 (11%)

Query: 401 EEMMVQSEKMLSVGSLAAGMAHEINNPLGAILHNAQNIRRRLSPELERNREAAEETGV-- 458
           ++ ++ SEKM S+G L AG+AHE+NNP+  +L N   ++R  +  LE   EA    G   
Sbjct: 196 QQQLLHSEKMASLGRLVAGVAHELNNPISFVLGNVLALKR-YAGRLETYLEAVHNRGCDC 254

Query: 459 --RLEAVNQYLQ----RREVPQLLDGIQQAGSRAAKIVSHMLSFSRMSNRQLADCHLPVL 512
              LE +   L+      ++  L+DG+ +   R   IV  +  FS +        +L  +
Sbjct: 255 IPELEELRSELRIDRILEDMSPLIDGMIEGAERTRDIVDGLKRFSALDREAAERFNLAEV 314

Query: 513 IDQALEIAGNDFALMEGFDFKAIDIVRDFDPRVD---RVPCIGN--ELEQVLLNLLKNAA 567
           + +A+              + A      F  R +    +P  G+  +L+QV++NL++NA 
Sbjct: 315 VQRAVR-------------WVAKSAPPSFTVRTELPAELPLRGSPGQLQQVVMNLVQNAL 361

Query: 568 QAIHAHQVGEPGQIILRTRLNPPWAEIQVEDNGGGIPENVRKRIFEPFFTTKEVGQGTGL 627
           QA  A   GE   +++   L      +   DNG GIP+     +F+PFFTTK VG+GTGL
Sbjct: 362 QATAAQPGGE---LLISGELGDRELRLIFHDNGPGIPDEALGHLFDPFFTTKPVGEGTGL 418

Query: 628 GLSVSYFIITNNHQGQMEVQCQPGHGTTFTLRLPLNSPA 666
           GLS+SY I+   H G++     P  G  F L LP + PA
Sbjct: 419 GLSISYGIV-ERHGGRIVASNHPEGGAVFRLTLPRDLPA 456