Pairwise Alignments
Query, 575 a.a., Flp pilus assembly protein TadD, contains TPR repeats from Pseudomonas stutzeri RCH2
Subject, 933 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H
Score = 67.8 bits (164), Expect = 2e-15
Identities = 96/440 (21%), Positives = 173/440 (39%), Gaps = 41/440 (9%)
Query: 157 LALSASETDPDTRAGLLQSFDKLLLKHPDNPQLTFGKAVLLQQDDRSDEALSLLQKQPAK 216
L+L+ ++ + A Q+ + +L P +P + + + + + A L A
Sbjct: 242 LSLAQAQIEAGKNAEARQTLNTVLADIPAHPWALYLRGLTAYRTNDMTAADKDLTAALAL 301
Query: 217 QRQI-PSILLEARLLHSLQRSDEALPLLEKSLR-QHPEDKRLRLTYARLLVEQERLEDAM 274
+ + P+I L + +++ ++A LL + +K A L++ R +++
Sbjct: 302 AKTLRPAIFLAGVVKYNIGEYEQASRLLAGLTETEGKSNKTADAVRAAALLKLGRDDESY 361
Query: 275 GEFATLVQQYPADDDLRFSMALVCMEAEAWREATAYLEELIERGSHVDAAYFNLGRAYQA 334
L DL A+ A A ++ Y ++ + A NLG A
Sbjct: 362 RLLRPLAAGDGETADLYAMAAVAAQGAAAMADSEGYYQKAVVLRPDDPALLTNLGIVKLA 421
Query: 335 MGRNAKALDALAQVGP--GNEYLPAKLLQSQLLYSAKRDQEASAVLADARQRQPDYA--- 389
G D L + G++ LL S LL D+ A A+ D +++ PD A
Sbjct: 422 RGDTTAGEDTLNRAAELEGDDKKALLLLFSSLLQKKDFDK-AEALAGDTKRKYPDRAWGW 480
Query: 390 -----IQ--------------------------LYLIEIEALSEHNRLEQAWKLAEQALE 418
IQ + + + AL + E A + E L
Sbjct: 481 TMDGMIQASRGDTAMARAAFETAVRKEPTAGDAVRNLALTALQSGDT-EGARGVVEGYLR 539
Query: 419 DFPDDLNLLYTRAMLAEKRGDLAQLERDLRFIIEREPDNAMALNALGYTLADRTNRHDEA 478
D + A +A KR DL +E+ LR +ER+P N A + L +L T+R A
Sbjct: 540 TNAGDSAMAMIAAAVANKRNDLVAVEKWLRQALERDPANMEAASNLA-SLLTSTSRPQAA 598
Query: 479 LQLIEQAYQLNPDDPAILDSLGWVNFRLGNLTEAEALLRKALQRFPDHEVAAHLGEVLWT 538
+ + + A +++PD PA++++LG +G+ T A +LR+A+ P L
Sbjct: 599 IIVAQDALRISPDTPAVMEALGKAQLLIGDYTAAADVLRRAVAIKPSGLTYYLLATAYLN 658
Query: 539 MGERSEARAVWAKALKLQPD 558
+ + + +KLQPD
Sbjct: 659 LNDPPRLKEALESVVKLQPD 678
Score = 49.7 bits (117), Expect = 5e-10
Identities = 120/536 (22%), Positives = 195/536 (36%), Gaps = 86/536 (16%)
Query: 85 AGVAERGFRIAEYLGAEQAALDTAMIWARNAPQSLDAQRAAAVQLARAGRYEESMEFMEK 144
AGV + + I EY EQA+ A + + A A L + GR +ES +
Sbjct: 312 AGVVK--YNIGEY---EQASRLLAGLTETEGKSNKTADAVRAAALLKLGRDDESYRLLRP 366
Query: 145 VLQGQGDTHFDFLALSASETDPDTRAGLLQSFDKLLLKHPDNPQL--------------- 189
+ G G+T + + + A + K ++ PD+P L
Sbjct: 367 LAAGDGETADLYAMAAVAAQGAAAMADSEGYYQKAVVLRPDDPALLTNLGIVKLARGDTT 426
Query: 190 ----TFGKAVLLQQDDRSDEAL---SLLQKQPAKQ---------RQIPSILLEARLLHSL 233
T +A L+ DD+ L SLLQK+ + R+ P + +
Sbjct: 427 AGEDTLNRAAELEGDDKKALLLLFSSLLQKKDFDKAEALAGDTKRKYPDRAWGWTMDGMI 486
Query: 234 Q--RSDEALP--LLEKSLRQHPEDKRLRLTYARLLVEQERLEDAMGEFATLVQQYPADDD 289
Q R D A+ E ++R+ P A ++ E A G ++ D
Sbjct: 487 QASRGDTAMARAAFETAVRKEPTAGDAVRNLALTALQSGDTEGARGVVEGYLRTNAGDSA 546
Query: 290 LRFSMALVCMEAEAWREATAYLEELIERGSHVDAAYFNLGRAYQAMGRNAKAL----DAL 345
+ A V + +L + +ER A NL + R A+ DAL
Sbjct: 547 MAMIAAAVANKRNDLVAVEKWLRQALERDPANMEAASNLASLLTSTSRPQAAIIVAQDAL 606
Query: 346 AQVGPGNEYLPAKLLQSQLLYSAKRDQEASA-VLADARQRQPDYAIQLYLIEIEALSEHN 404
++ P + L ++QLL D A+A VL A +P + YL+ L+ ++
Sbjct: 607 -RISPDTPAVMEALGKAQLLIG---DYTAAADVLRRAVAIKPS-GLTYYLLATAYLNLND 661
Query: 405 --RLEQAWKLAEQALEDFPDDLNLLYT---------------RAMLAEKRGDLAQLERDL 447
RL++A + + D D +L T + + GD E
Sbjct: 662 PPRLKEALESVVKLQPDHVDSRVMLATMIVDGGSLSDAKTAVEGVTTDFPGDPRAQEVRA 721
Query: 448 RFIIEREPDNAMALNALGYTLADRTNRHDEALQLIEQAYQ-----------------LNP 490
R++ + E A A+ L +L D R + L+ AY NP
Sbjct: 722 RYLAKAEGP-ASAITFLEASLTDPNTRPRNLVMLLASAYNEKGDGAKASSLLEDWVAKNP 780
Query: 491 DDPAILDSLGWVNFRLGNLTEAEALLRKALQRFPDHEVAA-HLGEVLWTMGERSEA 545
DD SL L +A+ L K L+R P+ +A +L EV+ +G+ S A
Sbjct: 781 DDYPGRLSLATQQIAANQLEKAKTTLEKGLERVPNDWIARNNLAEVMLRLGQTSAA 836
Score = 49.3 bits (116), Expect = 7e-10
Identities = 106/464 (22%), Positives = 184/464 (39%), Gaps = 76/464 (16%)
Query: 102 QAALDTAMIWARNAPQSLDAQRAAAVQLARAGRYEESMEFMEKVLQ-GQGDTHFDFLALS 160
+AA +TA+ R P + DA R A+ ++G E + +E L+ GD+ +A +
Sbjct: 497 RAAFETAV---RKEPTAGDAVRNLALTALQSGDTEGARGVVEGYLRTNAGDSAMAMIAAA 553
Query: 161 ASETDPDTRAGLLQSFDKLLLKHPDNPQLTFGKAVLLQQDDRSDEALSLLQKQPAKQRQI 220
+ D L + +K L + L++D + EA S L
Sbjct: 554 VANKRND-----LVAVEKWLRQ-------------ALERDPANMEAASNL---------- 585
Query: 221 PSILLEARLLHSLQRSDEALPLLEKSLRQHPEDKRLRLTYARLLVEQERLEDAMGEFATL 280
A LL S R A+ + + +LR P+ + +A+G+ L
Sbjct: 586 ------ASLLTSTSRPQAAIIVAQDALRISPDTPAVM--------------EALGKAQLL 625
Query: 281 VQQYPADDD-LRFSMALVCMEAEAWREATAYL--------EELIE-----RGSHVDAAYF 326
+ Y A D LR ++A+ + ATAYL +E +E + HVD+
Sbjct: 626 IGDYTAAADVLRRAVAIKPSGLTYYLLATAYLNLNDPPRLKEALESVVKLQPDHVDSRVM 685
Query: 327 NLGRAYQ--AMGRNAKALDALAQVGPGNEYLPAKLLQSQLLYSAKRDQEASAV-LADARQ 383
++ A++ + PG+ + + + Y AK + ASA+ +A
Sbjct: 686 LATMIVDGGSLSDAKTAVEGVTTDFPGDP----RAQEVRARYLAKAEGPASAITFLEASL 741
Query: 384 RQPDYAIQ-LYLIEIEALSEHNRLEQAWKLAEQALEDFPDDLNLLYTRAMLAEKRGDLAQ 442
P+ + L ++ A +E +A L E + PDD + A L +
Sbjct: 742 TDPNTRPRNLVMLLASAYNEKGDGAKASSLLEDWVAKNPDDYPGRLSLATQQIAANQLEK 801
Query: 443 LERDLRFIIEREPDNAMALNALGYTLADRTNRHDEALQLIEQAYQLNPDDPAILDSLGWV 502
+ L +ER P++ +A N L + R + A I A + PA+LD+ G +
Sbjct: 802 AKTTLEKGLERVPNDWIARNNLAEVML-RLGQTSAAYDQIVIARRSGGPQPALLDTEGQI 860
Query: 503 NFRLGNLTEAEALLRKA-LQRFPDHEVAAHLGEVLWTMGERSEA 545
++G +EA +LR A + R HL + L G++ EA
Sbjct: 861 LLKMGKASEAVEILRLATIDRNAPPTYGLHLAQALAAAGKKDEA 904
Score = 48.9 bits (115), Expect = 9e-10
Identities = 85/376 (22%), Positives = 141/376 (37%), Gaps = 56/376 (14%)
Query: 158 ALSASETDPDTR-AGLLQSFDKLLLKHPDNPQLTFGKAVLLQQDDRSDEALS-LLQKQPA 215
AL+ + + P+T G +++ + L L FGK QD + AL L PA
Sbjct: 122 ALTLARSIPETELVGAVKTIEGLAL---------FGKG----QDGAARLALDKALDIDPA 168
Query: 216 -KQRQIPSILLEARLLHSLQRSDEALPLLEKSLRQHPEDKRLRLTYARLLVEQERLEDAM 274
K I + +E H D A LL ++ P+D + + A + A
Sbjct: 169 DKDALIGAAQIETMAGHQ----DAARALLARAAAAAPDDVDVLVAQADTALSANDPAAAE 224
Query: 275 GEFATLVQQYPADDDLRFSMALVCMEAEAWREATAYLEELI-ERGSHVDAAYFNLGRAYQ 333
G F+ + P + +R S+A +EA EA L ++ + +H A Y AY+
Sbjct: 225 GLFSQAAARLPLNPLIRLSLAQAQIEAGKNAEARQTLNTVLADIPAHPWALYLRGLTAYR 284
Query: 334 AMGRNAKALDALAQVGPGNEYLPAKLLQSQLLYSAKRDQEASAVLADARQRQPDYAIQLY 393
A D A + PA L + Y+ ++AS +LA + +
Sbjct: 285 TNDMTAADKDLTAALALAKTLRPAIFLAGVVKYNIGEYEQASRLLAGLTETEGKSNKTAD 344
Query: 394 LIEIEALSEHNRLEQAWKLAEQALEDFPDDLNLLYTRAMLAEKRGDLAQLERDLRFIIER 453
+ AL + R +++++L + +L A+ A+ +A E
Sbjct: 345 AVRAAALLKLGRDDESYRLLRPLAAGDGETADLYAMAAVAAQGAAAMADSE--------- 395
Query: 454 EPDNAMALNALGYTLADRTNRHDEALQLIEQAYQLNPDDPAILDSLGWVNFRLGNLTEAE 513
GY ++A L PDDPA+L +LG V G+ T E
Sbjct: 396 -----------GY---------------YQKAVVLRPDDPALLTNLGIVKLARGDTTAGE 429
Query: 514 ALLRKALQRFPDHEVA 529
L +A + D + A
Sbjct: 430 DTLNRAAELEGDDKKA 445