Pairwise Alignments

Query, 403 a.a., Integrase from Pseudomonas stutzeri RCH2

Subject, 433 a.a., Integrase from Dechlorosoma suillum PS

 Score =  226 bits (576), Expect = 1e-63
 Identities = 133/398 (33%), Positives = 217/398 (54%), Gaps = 16/398 (4%)

Query: 6   LTDAKVKSVKPADRDWKLSDGGGLFLLVKPAGGKLWRWKYRLQG-KENLFAIGSFPQVSL 64
           LTD KV++ KPA++ +KL DG GL+L V+P+G K WR++Y +   K+ ++ IG +P VSL
Sbjct: 5   LTDTKVRNAKPAEKPYKLQDGQGLYLDVRPSGAKFWRYRYWITPEKDGIYTIGEYPVVSL 64

Query: 65  AEARTAREKARALVKQGIHPAHERQQVKQRNLEALAERKRAQESSFAKVAQAYLAEIKPV 124
           ++AR  RE AR   KQGI+P H ++  + R +   A       ++F  VA+ ++ + +  
Sbjct: 65  SDARREREWAREQAKQGINPTHAKEAERLRRMGEHA-------NTFEAVAREWIDQNRNH 117

Query: 125 FAHSSYRTKESRIRKYLSPKFDGMPMSDIGVKQIRPLLEECKAHGAWA-AIHVKGDLSAI 183
           +        E  +   + PK   +P+  +    +  ++   +  GA + A+ ++     I
Sbjct: 118 WTEKYLYQVERFLGNDVFPKIGALPIRMVTSAHLLGIIRTVEERGAKSIAVLIRQWSGQI 177

Query: 184 FEFAVVRGLVEANPIPSLRGLLRVPASESKAAMTREQIQKFYQALRGYRGYPETALCLRL 243
           F +AV     +++P   LRG ++         +++++I      L+ Y GY  T L  +L
Sbjct: 178 FRYAVATLRADSDPSAPLRGAIKKDPVRHNPPLSKDEIPVMLNKLQKYGGYRGTVLATKL 237

Query: 244 IALTACRPGEAADAEWEEFDFEDAVWRRPAAKMKARRE------HVSPLSAQAIAVLKDL 297
           +  T  R  E   AEW EFD E   WR PA +MK +++      H+ PLS QA+ VLK+L
Sbjct: 238 MLYTFVRTVELRKAEWTEFDLEGGEWRVPADRMKMKKQMKVGESHIVPLSRQALEVLKEL 297

Query: 298 QRITGGGRYLFPH-RSGKGFTTPNRLTYAMRDMNLGRGTTPHCWRTTFSTWANENGFRPD 356
           + ++GG ++LFP+ R+     T   +  A+  M      + H +R T ST  +E G+   
Sbjct: 298 KTLSGGRKFLFPNLRTPDTCMTATTINKALERMGYAGKFSGHGFRATASTMLHELGWNEK 357

Query: 357 AIERQLAHVESNKVRATYNKALLLDQRRSLLQAWAGYL 394
           AIERQLAH E NKV+A YN A  L +RR ++QAW+ ++
Sbjct: 358 AIERQLAHAERNKVKAAYNHAEYLPERREMMQAWSDWI 395