Pairwise Alignments

Query, 403 a.a., Integrase from Pseudomonas stutzeri RCH2

Subject, 413 a.a., integrase from Klebsiella michiganensis M5al

 Score =  186 bits (473), Expect = 8e-52
 Identities = 120/402 (29%), Positives = 208/402 (51%), Gaps = 21/402 (5%)

Query: 6   LTDAKVKSVKPADRDWKLSDGGGLFLLVKPAGGKLWRWKY--RLQGKENLFAIGSFPQVS 63
           L+  +++S KP + D+ L DG GL LL+K +G K+W+++Y   +  K    +IG +P V+
Sbjct: 8   LSVKEIESAKPKEADYVLYDGDGLELLIKTSGSKIWQFRYIRPVTKKRAKKSIGPYPSVT 67

Query: 64  LAEARTAREKARALVKQGIHPAHERQQVKQRNLEALAERKRAQESSFAKVAQAYLAEIKP 123
           LA+AR  R ++R+L+ + I P   +Q+  + +LEA     +     +  V +A + E   
Sbjct: 68  LADARNYRAESRSLLAKQIDPQEHQQEQLRSSLEAKTNTFQLVAERWWNVKKASVTED-- 125

Query: 124 VFAHSSYRTKESRIRKYLSPKFDGMPMSDIGVKQIRPLLEECKAHGAWAAIH-VKGDLSA 182
            +A   +R+ E  +     P    + ++DI    +   ++  +A GA   +  +   ++ 
Sbjct: 126 -YAEDIWRSLERDV----FPAIGDVSVTDIKAHTLVQAVQPVQARGALETVRRLCQRINE 180

Query: 183 IFEFAVVRGLVEANPIPSLRGLLRVPASESKAAMTREQIQKFYQALRGYRGYPETALCLR 242
           +  +A   GL++A P  ++      P  ++  ++  +Q+ +  Q +R       T     
Sbjct: 181 VMIYAQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTASISLSTRCLFM 240

Query: 243 LIALTACRPGEAADAEWEEFDFEDAVWRRPAAKMKARREHVSPLSAQAIAVLKDLQRITG 302
              LT  RP EAA+A WEE D E   W+ PA++MK  R+H  PLS +A+AVL+ ++ ++G
Sbjct: 241 WQLLTISRPAEAAEARWEEVDMEAREWKIPASRMKMNRDHTVPLSDEAMAVLEMMKPVSG 300

Query: 303 GGRYLFPHRSGKGFTTPNR------LTYAMRDMNLGRGTTPHCWRTTFSTWANENGFRPD 356
              ++FP R       PN+      +  +++    G     H  R+  ST  NE  F PD
Sbjct: 301 NREFIFPSR-----IKPNQPMNSQTVNASLKRAGFGGVLVSHGLRSIASTALNEQNFPPD 355

Query: 357 AIERQLAHVESNKVRATYNKALLLDQRRSLLQAWAGYLSAAE 398
            IE  LAHV+ N+VR  YN+   L+QRR ++Q WA ++ AA+
Sbjct: 356 VIEAALAHVDKNEVRRAYNRTDYLEQRRPMMQWWADFVMAAD 397