Pairwise Alignments

Query, 403 a.a., Integrase from Pseudomonas stutzeri RCH2

Subject, 423 a.a., prophage P4 integrase from Klebsiella michiganensis M5al

 Score =  163 bits (412), Expect = 1e-44
 Identities = 117/414 (28%), Positives = 205/414 (49%), Gaps = 41/414 (9%)

Query: 8   DAKVKSVKPADRDWKLSDGGGLFLLVKPAGGKLWRWKYRLQGKENLFAIGSFPQVSLAEA 67
           +A+  S +  ++D +LSDG GL+LL+K  G   WR +YR  G++ L ++G +  + LA A
Sbjct: 16  NARKLSGEIIEKDSRLSDGSGLYLLIKSNGSAYWRLRYRFNGEDRLISLGEYKYIPLALA 75

Query: 68  RTAREKARALVKQGIHPAHERQQVKQRNLEALAERKRAQESSFAK-----VAQAYLAEIK 122
           R  RE+ +  + +GI P   + +        +A +  A    ++K     + ++ L E+ 
Sbjct: 76  REKREEVKRNIARGIDPRGTKDEEGFLTFREVAMQWHASNRQWSKEHSRRILKSLLDEVF 135

Query: 123 PVFAHSSYRTKESRIRKYLSPKFDGMPMSDIGVKQIRPLLEECKAHGAWAAIHVKGDLSA 182
           PVF   +   K  + +  L P           VKQ++       +     A  +   +++
Sbjct: 136 PVFGDDN--IKLLKTQDLLKP-----------VKQVQ------DSGRLELASRIYQRINS 176

Query: 183 IFEFAVVRGLVEANPIPSLRGLLRVPASESKAAMTREQIQKFYQALRGYRGYPETALCLR 242
           +   AV  GL+E NPI    G L    SE +AA+  E I +F + +  ++G   T L + 
Sbjct: 177 VMTLAVDNGLLEFNPIAHKSGALIKRNSEHRAALELENIPEFLKRIEKFKGRRLTQLAMT 236

Query: 243 LIALTACRPGEAADAEWEEFDFEDAVWRRPAAK------------MKARREHVSPLSAQA 290
            +  T  R  E   A W+EFD E+++W  P+ +             K +  H+ PLS QA
Sbjct: 237 FLLHTFVRSSELRFARWKEFDLENSLWTIPSVREEIPGVKYSYRGSKMKTPHIVPLSHQA 296

Query: 291 IAVLKDLQRITGGGRYLF-PHRSGKGFTTPNRLTYAMRDM--NLGRGTTPHCWRTTFSTW 347
            +++++++ ITG   ++F      K   + N + +A++ M  +  +    H +RT   + 
Sbjct: 297 CSIIQEIKSITGERIFVFTSDHFPKKPMSENTINHALQSMGYDTKKDLCSHGFRTMACSA 356

Query: 348 ANENG-FRPDAIERQLAHVESNKVRATY-NKALLLDQRRSLLQAWAGYLSAAEH 399
             E+G +  DAIERQ++H E N VRA Y +KA L+ +R+ ++Q W+ YL   +H
Sbjct: 357 LIESGKWSRDAIERQMSHQERNNVRAAYIHKAELIPERQKMMQWWSDYLMQLQH 410