Pairwise Alignments

Query, 361 a.a., TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component from Pseudomonas stutzeri RCH2

Subject, 334 a.a., TRAP-type periplasmic solute-binding protein from Sinorhizobium meliloti 1021

 Score = 61.2 bits (147), Expect = 4e-14
 Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 6/217 (2%)

Query: 54  VKHLSESLKAVSGGDIQLRYYEPGELVPPFEIMDAVSSGKYPAGYTWIGYDQGTIPALPL 113
           +K +   L   SGG ++L  +  G L    +   A+ SG   A  T      G IPAL +
Sbjct: 46  IKAMQACLDQKSGGKLKLTAFWGGALGGDLQATQALRSGVQEAVVTSSSPLVGIIPALGV 105

Query: 114 YSGAPFNMEPPAHLAWYYQGDGKKLLEEIYAQRNIHPMLCSIIGPEGAGWFAKPIEKLED 173
           +   PF             GD   ++ E      +  +     G        +P+ K ED
Sbjct: 106 FD-LPFLFANAQEAYTVLDGDFGDMMNEKLEAAGLVNLAYWENGFRNLSNSVRPVTKWED 164

Query: 174 FDGLRIRFA--GIGGKVLEKLGASVTMVPGGEIYQALERKTIDATEFSQPAVDKMLGLDQ 231
           F+G+++R     I     + LGA+ T +  GE++ ALE K IDA E     +D     + 
Sbjct: 165 FEGMKVRVMQNNIFLDTFQNLGANATPMAFGEVFSALETKAIDAQENPYVTIDTSKFFE- 223

Query: 232 IIKNYIMPGWHQTLTTSHLLVNKDVWDKLKPESRALI 268
            ++ Y+    H   T    L +K ++D   PE +A +
Sbjct: 224 -VQKYVTETNH-AYTPFLFLFSKPIFDSYTPEEQAAL 258