Pairwise Alignments

Query, 500 a.a., putative peptide transporter subunit: periplasmic-binding component of ABC superfamily from Azospirillum brasilense Sp245

Subject, 538 a.a., ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

 Score =  177 bits (448), Expect = 1e-48
 Identities = 136/502 (27%), Positives = 238/502 (47%), Gaps = 22/502 (4%)

Query: 3   KRLVARAVLSAFLLSGTALS---------AQAA----GTLKVAVDSN--LNTLDPAKMKG 47
           +R V RA+ +A ++S T            AQA     G ++VA  S    +TLDPAK   
Sbjct: 27  RRGVLRAMAAAGMMSVTGAGLLTASGEALAQATPRQGGKIRVATQSASAADTLDPAKGSL 86

Query: 48  GQEYVAAYLLFNGLTAIAADMTLKPDLAERWEHSADLKTWTFFLKKGVKFHSGREMDAED 107
           G +Y   ++ +N LT + + +  K  LA   + + D   W   L+ GV+FH G+ +   D
Sbjct: 87  GTDYARGFMFYNCLTELDSHLGAKMSLATSLD-TKDATVWVVKLRNGVQFHDGKALAPAD 145

Query: 108 VLATITRIQDKATGSTARVNFEIVESMKAVDSHTVEFTLKSPYSGFAELFGERQARIVPR 167
           V+ +I R +D AT S A+   + ++ +KA   + V  TL  P +    +      +I+ +
Sbjct: 146 VVYSIMRHKDPATASKAKTLADQIKDVKATGPNEVTITLVGPNADLPVILATSHFQII-K 204

Query: 168 DGLDTLASNPVGTGPFQFVSFAPGDRMVVKRNPTYFEAGLPKLDEVVIRILPETASQVAA 227
           DG     +  +GTGPF+   F+PG R +  RN  Y++ GLP LDEV +  + + +++V A
Sbjct: 205 DGTKDFKT-AIGTGPFKVKEFSPGVRTIGVRNEKYWKPGLPHLDEVELIGIGDESARVNA 263

Query: 228 LTTGELDLAWNLPPEAVDKVKATSNLKAEAVPTSTWDGVIMNGTTKPFDDVRVRRAVATA 287
           L +G++ L   + P +  ++KA S        +  +  +I+        +   RR +   
Sbjct: 264 LLSGDVQLINAVSPRSTTQIKAASGFSVLETKSGVYTDLIVRDDGGITGNDDFRRGMMYL 323

Query: 288 LDKQAITQIALFGYGT-PTHSPIPPSHPYFNKDLAIAKGDPAAAKKMLAEAGYPNGFEVT 346
            D++ + +    GYGT     PI P++ Y+   L     DP  AK    +A   +     
Sbjct: 324 QDREQMRRAIFQGYGTIGNDQPIDPTNKYYLAGLPQRAFDPDKAKFHFQKAKVGSAPIQI 383

Query: 347 LYTPAGRATRERLGLAVRELLKPAGITVNVQRVPFDVFLKDIEGKAGFYIDGFFSRPTID 406
             +PA   + E + + ++++   AG+ + V RVP D +  +   K         +RP+ D
Sbjct: 384 FASPAAEGSVE-MAMFLQQVAPQAGLNLQVSRVPADGYWSNHWMKHPLGFGNINARPSAD 442

Query: 407 TSVYPWYHSRGSWNAALWNYSNPAMDKLLDGARQASSEEEAKKLYGEVQALAVQDAPGVI 466
                ++ S   WN A  N+ +P  D+LL  AR    + + K+LYG++Q L  +     I
Sbjct: 443 VIFTQFFKSDAPWNEA--NWKSPKFDQLLLQARGEPDDVKRKQLYGDMQVLVHETGGIGI 500

Query: 467 PYVINHVNGVSARVQGFTSHPM 488
           P   + ++    +++G  S P+
Sbjct: 501 PLFQSSLDAYPNKLKGLGSIPL 522