Pairwise Alignments

Query, 534 a.a., ABC transporter substrate-binding protein from Azospirillum brasilense Sp245

Subject, 538 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  172 bits (436), Expect = 3e-47
 Identities = 150/526 (28%), Positives = 226/526 (42%), Gaps = 39/526 (7%)

Query: 12  LTLGASVLAAGAGRALAAAGPVKGGTLIAVINPEPPILTNTVNNHFSVNVVSPNIYDGLL 71
           L L     AA  G    A    +GG +      +   L   +   +    +  +++DGL+
Sbjct: 4   LLLAGVCTAALMGNPALADDIKQGGEMTVTYKDDVSTLDPAIGYDWQNWSMIKSLFDGLM 63

Query: 72  SYDQQMNPI-PALAERFELSPDKLSITFHLRKGVTWHDGTPFTSRDVAYSVLELWKKHHP 130
            Y      + P LAE +E+S D    TF LRKGV +H+G   T++DV YS+  +      
Sbjct: 64  DYVPGTTELRPDLAESYEISEDGKIFTFKLRKGVKFHNGRELTAQDVKYSIERVVNPATQ 123

Query: 131 RGRTTF---------------GDVTAVETPDALTAVLRLSRPSAIILNALSAAESQVLPA 175
                F               G+++ +   D  T    L+RP A  L+ ++   + V+P 
Sbjct: 124 SPGAGFFATIKGVEEASAGKGGELSGITVQDPHTIRFELTRPDATFLHVMALNFAHVVPK 183

Query: 176 HLYENTDPRTNPRNINPVGTGPFRFVEWKRGEYIAFERNPTYWDVGKPYVDRLIFRIIPD 235
              E  +        NPVG+G F+  EW  G+ + FER   YW+ G P +DR+ F +  +
Sbjct: 184 ---EEVEKHGADFGKNPVGSGAFKLAEWTLGQRLVFERFTDYWNEGLPKLDRITFEVGQE 240

Query: 236 AASRAAAFETGEVVYGPFDPIPLADAARLRANPELA-LTTAGYQWLSPFFTFEFNVKSKI 294
                   + GE+   P D IP A    +  +P    L   G Q  + + T   NVK   
Sbjct: 241 PVVALLRLQNGEIDV-PGDGIPPAKFVEVTNDPNFKDLIIRGGQLHTGYVT--MNVKMAP 297

Query: 295 TGDVRVRRAIAHAIDRKGLIEAAWYGFGTPATGPIPHYQKAYTKDVAGYPFDPAAAERLL 354
              V VR+A+  AI++  ++     G    A  P+P     Y KD AGY +DP  A++LL
Sbjct: 298 FDKVEVRKAVNMAINKDRILRII-NGRAVAANQPLPPSMPGYAKDYAGYAYDPEGAKKLL 356

Query: 355 DEAGYRRGADGVRFALWHDYSNDTESQQNTAEFLRQNLKAVGIDLKLRA-ADLPTYYKRV 413
           ++AG     DG    L   Y  +T+ Q   A+ ++Q+LKA+GI   +++ A         
Sbjct: 357 EQAGL---GDGFSTEL---YVMNTDPQPRIAQAIQQDLKAIGITASIKSLAQANVIAAGG 410

Query: 414 YTNYDYDTRSGQFSAMI---DPSLGLYRLYATSSIAPGVPNTNGAQYSNPELDAVIETAL 470
             N      SG  + +    DPS     +       PG    N + Y N ELD     A 
Sbjct: 411 EENQAPMIWSGGMAWIADFPDPSNFYGPILGCGGAVPG--GWNWSWYCNEELDKKAAEAD 468

Query: 471 RESDPAKRTEAFHAWQRI---AMTDLPNIPLFELERVTLHSRRVKG 513
             +DPAK  E    W+ I    M D P  P+F  ER T+ S R+ G
Sbjct: 469 AIADPAKAAEREALWRDIYLKIMEDAPWAPIFNEERFTIRSERIGG 514