Pairwise Alignments

Query, 1598 a.a., hypothetical protein from Azospirillum brasilense Sp245

Subject, 1179 a.a., type VI secretion protein IcmF from Pseudomonas stutzeri RCH2

 Score = 50.4 bits (119), Expect = 1e-09
 Identities = 83/313 (26%), Positives = 118/313 (37%), Gaps = 55/313 (17%)

Query: 5   APPGPACSTLLG--RRRPMLPADGLILTVPL--------AELDDVRRATARGTELYARLW 54
           A  G    TLLG  R+R   P +G+++ +P+         EL+++ R T +      RL 
Sbjct: 199 AVDGSVWDTLLGLLRKRRARPLNGVLVNLPVDQLQGGSELELENLARQTRQ------RLH 252

Query: 55  EIQRTLGFALPVYVVVTGCEEAPGFAALAEALPPSLTGGMLGWSSPYALETAFSPDFVSE 114
           EI + L   +PVY+V++  +   GF    E L    +  +LG +S    +       V +
Sbjct: 253 EIHQRLNVDVPVYLVLSKADRILGFDDFFEQLSREESDQVLG-ASFRKEQNGSDAQVVRQ 311

Query: 115 ALQSLADGLLA-VELEVFGATATPDGAPLFALTERLTGTEAALRALLGTAFKRTAYQETL 173
             + L   L + V L +     T     +     +L      L   +  AF    YQ   
Sbjct: 312 EFEELLRRLNSQVILRMHQERDTQRRGRILDFPHQLGQIGERLSLFIELAFAGNRYQRAS 371

Query: 174 YVRGLYFTGRP------DPDAA--------------------ALFGRDLLNRKIFPEAGL 207
            +RG Y T  P      DP  A                    A F   LL+R IFPEA L
Sbjct: 372 QLRGFYLTSAPQLRETLDPLTAGIGRQLGLSSSALPTFRSGRARFINQLLSRVIFPEAEL 431

Query: 208 PKPTRALAASRAWRRYSWPVGTGAAALAAILLLWMGVQRASTLS--DRLVPVLADIPGGL 265
                A    R  RR  W      A     LLL+ G   A   S     +  L DI    
Sbjct: 432 -----AGLDQREVRRIDWGQRALYAGAFGCLLLF-GAAWALNFSGNHERLEQLRDI---A 482

Query: 266 QQLADQRPAVEAG 278
           Q+L  +R  +EAG
Sbjct: 483 QRLGSERKTIEAG 495