Pairwise Alignments

Query, 396 a.a., membrane protein from Azospirillum brasilense Sp245

Subject, 408 a.a., Predicted transporter component from Pseudomonas stutzeri RCH2

 Score = 95.9 bits (237), Expect = 2e-24
 Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 4/158 (2%)

Query: 219 RFLRGPWPLVWGAVALAVLNFATLALAGRPWGITSAFALWGSKGLAALGVDVASWPFWQA 278
           R+L   W  +   VAL V +    A+ G  W +T  F  WG   ++  G     W +++ 
Sbjct: 10  RYLVRFWSPLPALVALGVASAYYFAITGTFWAVTGEFTRWGGHVISWFGYAPEEWSYFKL 69

Query: 279 PAQARALQESVLADVTSVMDFGIILGALLAAGLAGKFAPVWKLPLRSLVAAVIGGLLLGY 338
                 L  + L  V  VM  G++ GAL AA  A   +  W    R L+  +IGG++ G+
Sbjct: 70  IG----LSGTPLDRVDGVMIIGMLFGALCAALWANNVSLRWPTSKRRLLQGLIGGVVAGF 125

Query: 339 GSRLAYGCNIGAYFSGIASGSLHGWVWIVAALAGNYLG 376
           G+RLA GCN+ A+F+GI   SLH W +++A + G ++G
Sbjct: 126 GARLAMGCNLAAFFTGIPMFSLHAWAFMLATVGGAWIG 163



 Score = 45.4 bits (106), Expect = 3e-09
 Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 7/150 (4%)

Query: 7   RVVTVALLALVGGGLWIGDAVSGRQAALYLVGGVLGLVLYHALFGFTSAFRVFIADRRGA 66
           R+ T   +  V    W  DA      A+ L G + G ++  A   FTSA R      R  
Sbjct: 201 RIGTAVAVLAVAFAAWRFDASLVLGMAV-LFGLLFGGLIERAQICFTSAARDLWTTGRTR 259

Query: 67  GLRAQMVMLAVACALFFPVLAAGTLFGTPVKGLVSPVGLSVVAGAFLFGIGMQLGGGCAS 126
                ++ +AVAC   F  +A G          +  +G + + G  LFGIG+ + GGC +
Sbjct: 260 AAYGILLGMAVACVGTFGAIALGA------SPKIFWMGPNAIIGGVLFGIGIVVAGGCET 313

Query: 127 GTLFTVGGGSTRMVVTLAFFIVGSVLGAYH 156
           G ++    G     V     ++G  L A +
Sbjct: 314 GWMYRAMEGQVHFWVVGVGNVIGGTLVAVY 343



 Score = 34.7 bits (78), Expect = 5e-06
 Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 17/86 (19%)

Query: 299 FGIILGALLAAGLAGKFAPV---------WKLPLRSLVAAVIGGLLLGYGSRLAYGCNIG 349
           +GI+LG  +A    G F  +         W  P      A+IGG+L G G  +A GC  G
Sbjct: 262 YGILLG--MAVACVGTFGAIALGASPKIFWMGP-----NAIIGGVLFGIGIVVAGGCETG 314

Query: 350 AYFSGIASGSLHGWVWIVAALAGNYL 375
             +  +  G +H WV  V  + G  L
Sbjct: 315 WMYRAM-EGQVHFWVVGVGNVIGGTL 339



 Score = 25.0 bits (53), Expect = 0.004
 Identities = 45/175 (25%), Positives = 63/175 (36%), Gaps = 34/175 (19%)

Query: 105 LSVVAGAFLFGIGMQLGGGCASGTLFTVGGGSTRMVVTLAFFIVGSVLGAY------HLP 158
           L  + G  + G G +L  GC     FT   G     +    F++ +V GA+       LP
Sbjct: 114 LQGLIGGVVAGFGARLAMGCNLAAFFT---GIPMFSLHAWAFMLATVGGAWIGVKICLLP 170

Query: 159 WWQ---------------AQWTAAPVSVVAAWGWPVA-LAVNLAIF---AAVYAGTLALE 199
           W +               A+ T    +V A  G  VA LAV  A +   A++  G   L 
Sbjct: 171 WLRTPLKVGSQASSLFGDAEGTRRRATVQARIGTAVAVLAVAFAAWRFDASLVLGMAVLF 230

Query: 200 KRRHGRLIEGAPARTEGLRRFL------RGPWPLVWGAVALAVLNFATLALAGRP 248
               G LIE A        R L      R  + ++ G     V  F  +AL   P
Sbjct: 231 GLLFGGLIERAQICFTSAARDLWTTGRTRAAYGILLGMAVACVGTFGAIALGASP 285