Pairwise Alignments

Query, 841 a.a., histidine kinase from Azospirillum brasilense Sp245

Subject, 801 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  284 bits (726), Expect = 2e-80
 Identities = 161/391 (41%), Positives = 238/391 (60%), Gaps = 8/391 (2%)

Query: 453 ERKGLEAQFAQSQKMQAVGQLAGGVAHDFNNLLTAMIGFCDLL---LLRHKPGDQSFSDI 509
           ER+ +EA   Q Q+++AVGQL  GVAHDFNNLLT ++     L   L +  P ++S   +
Sbjct: 411 ERERVEATLQQMQRLEAVGQLTAGVAHDFNNLLTVILTSASFLQNDLEQGAPAERSLRRL 470

Query: 510 MQIKQNANRAANLVRQLLAFSRQQTLQPRILSVTDVLAELGNLMRRLIGENIELKMLHGR 569
             I+++  R A L  QLLAF+R+Q L P  + + D L  L +L++  +G ++ ++     
Sbjct: 471 QYIRESGERGATLTSQLLAFARRQQLTPTAIDLNDTLVSLLSLLKSTLGGSVSIETDTQA 530

Query: 570 DIGYVKVDQNQLEQVIINLVVNARDAMAGGGRLTIVTSNHVVEQAQRREHETIPAGDYVS 629
           +I +  VD  Q+E +I+NL +NARDAM   GRLT+ T N V+ +   R  +  P G+YV 
Sbjct: 531 NIWHALVDPTQIEMIILNLAINARDAMGDSGRLTLGTRNVVITEPALRAEDPSP-GEYVV 589

Query: 630 IEVIDTGCGIPKENLQRIFEPFFTTKGVGSGTGLGLSTVYGIVRQTGGFVLVESEKGEGT 689
           + V DTG G+ +E L + FEPFFTTK VG G+GLGL+ V+G  +Q+GG   +ES  G GT
Sbjct: 590 LSVTDTGTGMSEEVLSKAFEPFFTTKEVGKGSGLGLAQVFGFAKQSGGGARIESRPGAGT 649

Query: 690 TFTILLPRHKGEARPDQGEPRERRGSDLTGSGTIMLVEDEDAVRVFSARALRNKGYQVLE 749
           T  + LPR +  A  +          +      I+LV+D+ AVR  +A+ L+N G+ V+E
Sbjct: 650 TVKVFLPRTEPPAATEPTAALSAGSQEDNSQHRILLVDDDHAVREVTAQMLQNLGFAVIE 709

Query: 750 AKNGEAALQQIGTDGSRIDLLITDVVMPQMDGPTLARHVRQVRPDMRVIFISGYAEDRLG 809
           A +GE ALQ +G +G  +DLL+ D  MP M+G  LAR VR  +P++ VIF++GYAE  L 
Sbjct: 710 ADSGEHALQLLG-EGIEVDLLLADFAMPGMNGGELARAVRVGQPELPVIFVTGYAE--LC 766

Query: 810 EIDGVEVAHFLPKPFSLKQLASKVKEVIRDG 840
           E+ G+     + KPF   QLA+K+   +R+G
Sbjct: 767 EL-GLVGYSIIQKPFREDQLANKIHLALREG 796



 Score = 31.2 bits (69), Expect = 2e-04
 Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 11/111 (9%)

Query: 722 TIMLVEDEDAVRVFSARALRNKGYQV-LEAKNGEAALQQIGTDGSRIDLLITDVVMPQMD 780
           +++ +ED       +  AL   GY +  E     A + +        DL++ D ++P   
Sbjct: 8   SVLFIEDSPHDAELAQLALERSGYTLHTELVYSHAGVVE-ALQRRSFDLILADFILPGFS 66

Query: 781 GPTLARHVRQVRPDMRVIFISG-YAED------RLGEIDGV--EVAHFLPK 822
           G    +  +++ P    IF+SG + E+      R G +D V  +   FLPK
Sbjct: 67  GSQALQEAQRLAPQTPFIFLSGVFGEEHAVNMMRSGAVDYVLKQKLGFLPK 117