Pairwise Alignments

Query, 841 a.a., histidine kinase from Azospirillum brasilense Sp245

Subject, 821 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  282 bits (721), Expect = 6e-80
 Identities = 167/386 (43%), Positives = 242/386 (62%), Gaps = 8/386 (2%)

Query: 458 EAQFAQSQKMQAVGQLAGGVAHDFNNLLTAMIGFCDLLLLRHKPGDQSFSD--IMQIKQN 515
           E +  QSQKM+AVGQL GG+AHDFNNLL  + G  +L+ +R   G  +  D  ++  +  
Sbjct: 438 EEKLRQSQKMEAVGQLTGGLAHDFNNLLAGISGALELMSMRIAQGRLNDIDKYMLSAQSA 497

Query: 516 ANRAANLVRQLLAFSRQQTLQPRILSVTDVLAELGNLMRRLIGENIELKMLHGRDIGYVK 575
           A RAA L  +LLAFSR+QTL PR + V  ++  +  L++R +G +I L+ +   D+    
Sbjct: 498 AKRAAALTHRLLAFSRRQTLDPRPVDVNLLVEGMTELIQRTVGPSIRLETISAPDLWPAS 557

Query: 576 VDQNQLEQVIINLVVNARDAMAGGGRLTIVTSNHVVEQAQRREHETIPAGDYVSIEVIDT 635
           VD +QLE  I+NL +N+RDAM  GGR+TI T+N  ++    + ++ +PAG+Y+S+ V DT
Sbjct: 558 VDTSQLENAILNLCINSRDAMPDGGRITIETANQWLDSDAAQAND-LPAGEYLSLTVTDT 616

Query: 636 GCGIPKENLQRIFEPFFTTKGVGSGTGLGLSTVYGIVRQTGGFVLVESEKGEGTTFTILL 695
           G G+    + + F+PFFTTK +G GTGLGLS +YG  +Q+GG V + SE G GT   I L
Sbjct: 617 GTGMTPGVIAKAFDPFFTTKPIGEGTGLGLSMIYGFAKQSGGQVRISSEVGRGTAMCIYL 676

Query: 696 PRHKGEARPDQGEPRERRGSDLTGS-GTIMLVEDEDAVRVFSARALRNKGYQVLEAKNGE 754
           PRH GE       P +   + LTGS GTI++V+DE  VR+     L + GY ++EA +  
Sbjct: 677 PRHLGETGIGAVVPAQTAAA-LTGSCGTILIVDDEPTVRMLLMDVLGDLGYTLIEASDSV 735

Query: 755 AALQQIGTDGSRIDLLITDVVMP-QMDGPTLARHVRQVRPDMRVIFISGYAED-RLGEID 812
           A L+ + +D S IDLLITDV +P  M+G  +A   R+VR +++ +FI+GYAE   LG   
Sbjct: 736 AGLKLLQSDVS-IDLLITDVGLPGGMNGRQMADAGREVRQELKTLFITGYAESAALGNSS 794

Query: 813 GVEVAHFLPKPFSLKQLASKVKEVIR 838
                  L KPFS+  LA++V E++R
Sbjct: 795 LGVGMQVLTKPFSIDALAARVLELLR 820



 Score = 32.3 bits (72), Expect = 1e-04
 Identities = 22/80 (27%), Positives = 31/80 (38%)

Query: 277 LLEGGGLEQRGEIAMDGLQGRRFQAYVAQSVVRGEDGRISHTRSVVRDLTPEREWQEALR 336
           +++ GG     E     + G          V+R   GR       + DLT  R  + ALR
Sbjct: 87  VIDSGGTTWTDEYRFQRVDGSYADILDRGHVIRTVQGRAVRMIGAMLDLTRVRAAEAALR 146

Query: 337 LSEQRFQRFFEDAPIGIALV 356
            SE+RF    E      A+V
Sbjct: 147 QSEERFSAILETIEAAFAIV 166