Pairwise Alignments

Query, 359 a.a., recombinase RecA from Azospirillum brasilense Sp245

Subject, 357 a.a., recA protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  450 bits (1158), Expect = e-131
 Identities = 224/345 (64%), Positives = 278/345 (80%), Gaps = 8/345 (2%)

Query: 15  DKQKALDAALAQIERAFGKGSIMKLGARENTVETEVVSTGSLGLDIALGIGGLPRGRIIE 74
           +K+KAL A L+QIE+ FGKGSIMKLG  + +++ E +STGSL LD+ALG GGLP GRI+E
Sbjct: 6   NKEKALAAVLSQIEKQFGKGSIMKLG-EDRSMDVETISTGSLSLDVALGAGGLPMGRIVE 64

Query: 75  IYGPESSGKTTLALHAIAQAQKGGGTCAFVDAEHALDPSYARKLGVNVDELLISQPDAGE 134
           IYGPESSGKTTL L  IA AQ+ G TCAF+DAEHALDP YA+KLGV++D LL SQPD GE
Sbjct: 65  IYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124

Query: 135 QALEIADTLVRSGAVDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSIA 194
           QALEI D L RSGAVDV++VDSVAAL P+AE+EGE+GDSH+GL AR+MSQA+RKL G++ 
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184

Query: 195 KSNCLVIFINQIRLKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKDRETVVGNQTR 254
           +SN L+IFINQIR+KIGVMFGNPETTTGGNALKFYASVRLDIRR GAIK+ + VVGN+TR
Sbjct: 185 QSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNETR 244

Query: 255 VKVVKNKMAPPFRVVEFDIMYGEGVSKVGELLDLGIQAGVVEKSGAWFSYDGTRIGQGRE 314
           VKVVKNK+A PF+  EF I+YG+G+++ GEL+DLG+   ++EK+GAW+SY G +IGQGR 
Sbjct: 245 VKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQGRA 304

Query: 315 NAKNYLRNNPATADAIEAKIRGNAGLVADAMMGTPEADGEAATPE 359
           NA  YL  NPA A  I+  +R       + ++  P A   +A+ +
Sbjct: 305 NAGKYLTENPAIAAEIDKTLR-------ELLLSNPSALASSASDD 342