Pairwise Alignments

Query, 211 a.a., homoserine lactone transporter from Azospirillum brasilense Sp245

Subject, 207 a.a., transporter, LysE family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  140 bits (353), Expect = 2e-38
 Identities = 81/210 (38%), Positives = 119/210 (56%), Gaps = 16/210 (7%)

Query: 6   LGFFFATAFVLSMTPGPNMLLAMSLGLRYGVRRAAWGGLGMCVALTTMATLSVLGLGALL 65
           L  F  T F +++TPG  M LAM+LG+  GVRR  W  LG  + +  +AT +V+G+ +++
Sbjct: 7   LAVFIPTFFFVAITPGMCMTLAMTLGMSIGVRRTLWMMLGELIGVALVATAAVMGVASIM 66

Query: 66  AASEPAFQAVKWAGVAYLTWLGIAAWRAP-----VPDG--SPRVSGAAAAEEAPAHRLFL 118
                 FQ  KW G  YL ++G+  WRA      + D   +PRVS            L  
Sbjct: 67  LNYPEVFQIFKWVGGLYLGYIGVQMWRARGKMAILSDDKTNPRVSNLT---------LIS 117

Query: 119 RGLLVAFSNPKALVFMAALFPQFIDPATPLMPQLVALVAIMVVIEFGWIMAYATGGNSIG 178
           +G + A +NPK   FM +L P FI+    + PQL+AL++I++V EF  ++AYA+GG S+ 
Sbjct: 118 QGFITAIANPKGWAFMVSLLPPFINAEREVAPQLLALLSIIMVTEFTSMLAYASGGKSLR 177

Query: 179 ARLTSGSAARTLNRLTGGLMIGAGGLLALA 208
             L+ G   R LNR+ G LMIG G  LA++
Sbjct: 178 IFLSRGDNIRWLNRIAGSLMIGVGIWLAIS 207