Pairwise Alignments

Query, 366 a.a., ABC transporter substrate-binding protein from Azospirillum brasilense Sp245

Subject, 361 a.a., Spermidine/putrescine-binding periplasmic protein from Pseudomonas stutzeri RCH2

 Score =  324 bits (831), Expect = 2e-93
 Identities = 169/355 (47%), Positives = 234/355 (65%), Gaps = 2/355 (0%)

Query: 12  VAAIAIAGPALAQAKKPVNIYIWNDYLGESTLADFTKATGYDTKVDLYDSLELLEQKVLV 71
           + A A+ G A AQA   V+IY W+DY+GE+TL +F K TG     D++DS E LE K+L 
Sbjct: 9   LVAAAMTGAATAQAAS-VHIYNWSDYIGETTLEEFEKETGIKPVYDVFDSNETLEGKLLA 67

Query: 72  GKSGYDVIVPTAEPTLSRMIQAKVVAPLDKAKIPNLKNVDPKVLKLLENSDPGNKFAVPY 131
           G+SGYDV+VP+    L + I+A     LDK+K+PN +++DP +LK L+ +DPGN  A PY
Sbjct: 68  GRSGYDVVVPSNH-FLGKQIRAGAFQALDKSKLPNWEHLDPALLKQLQKNDPGNAHAAPY 126

Query: 132 LGGTVGIAIIPEKIKAVAPDVPLDSWDLIFKPEVAKKVAACGITVMDSAIDVIPSVLNYL 191
           L GT GI    EK+KA      +DSW +IF+PE A K+A+CGI  +DSA ++IP++LNYL
Sbjct: 127 LWGTNGIGYNVEKVKAALGVDEIDSWSVIFEPENAAKLASCGIAFLDSADEMIPAMLNYL 186

Query: 192 GLDPNSEKKEDLDKVEKTLLAVRPYIKQFVTGQNINILAGGDACVVMAYNGDAIQGAARA 251
           GLDPNSE   D  K E+ LLAVRP+++ F + + I+ LA G+ CV   ++GD  Q AARA
Sbjct: 187 GLDPNSENAADYQKAEEKLLAVRPHVRYFHSSKYISDLANGNICVAAGFSGDVFQAAARA 246

Query: 252 EEAKNGVKVEYITPKEGVQVWWDTLAIPADAPNKEGAHAYINFILDPANIAAVSNTVSYA 311
           EEA  G+++ Y  P EG  +W+D LAIPADA N E AHA+IN++L P  IAAVS+ V YA
Sbjct: 247 EEAGKGIEIAYAIPAEGANLWFDMLAIPADASNVEEAHAFINYLLRPEVIAAVSDYVGYA 306

Query: 312 NAVPASLASVDEGVKTNPAVFLPENSSLKLFALKSIKQTTDRARTRVWTKVKTGK 366
           N    +   +D+ V+ + +V+ P+    +L+    +     R  TR WTKVK+GK
Sbjct: 307 NPNLKAGELMDQEVREDASVYPPQEVLDRLYVSAELPPKIQRLMTRTWTKVKSGK 361