Pairwise Alignments

Query, 382 a.a., NADH dehydrogenase from Azospirillum brasilense Sp245

Subject, 601 a.a., NADH dehydrogenase I, C/D subunits (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  317 bits (813), Expect = 4e-91
 Identities = 161/386 (41%), Positives = 236/386 (61%), Gaps = 7/386 (1%)

Query: 1   MNFGPQHPAAHGVLRLVMELNGEVVERCDPHIGLLHRGTEKLIEYKTYLQAVPYFDRLDY 60
           +N GP HP+AHG  RLV++L+GE V  C P IG  HRG EK+ E +++   +PY DR++Y
Sbjct: 219 LNLGPNHPSAHGAFRLVLQLDGEEVRNCVPDIGYHHRGAEKMGERQSWHSYIPYTDRVEY 278

Query: 61  VSPMCMEHAYVLGIENLLQIKAPLRAQYIRVLFSEITRILNHILSITTGALDVGAITPAL 120
           +  +     YVL +E L  IK P R   IRV+ +E+ RI +H+L + T   DVGA+TP  
Sbjct: 279 LGGVMNNLPYVLAVEKLAGIKVPQRVDMIRVMMAELFRIQSHLLFLGTYIQDVGAMTPVF 338

Query: 121 WGFEEREILMEFYERVCGARLHANYFRPGGVAWDLPAG----LTDDIWEFTERFPKFVDD 176
           + F +R+ +    E + GAR+H  +FR GGVA DLP G    + D++  +    PK + D
Sbjct: 339 FTFTDRQHIYTIIEAITGARMHPAWFRIGGVAHDLPKGWQRLVQDNLLSW---LPKRLMD 395

Query: 177 IDNLLTNNRIFKQRTVDIGVVTKEEAFNWGFTGPMLRGSGVAWDLRKSQPYEVYDRMDFD 236
            +     N I + RT+ +   T E+A  WG TG  LR +G+ +D+RK +PY  Y++ DF+
Sbjct: 396 YEKAAMRNSILRGRTIGVAAYTTEQALAWGTTGAGLRATGLNFDVRKWRPYSGYEQFDFE 455

Query: 237 VPVGLTGDCWARYLVRMEEMRQSNRMIRQCLKELPEGPVRAEERKVSPPPRGEMKRSMEA 296
           VPVG  GD + R  VR+EE+RQS R+I QC+  +PEGP +A+    +PPP+    + +E 
Sbjct: 456 VPVGSNGDAYDRATVRIEEIRQSMRIIEQCMNNMPEGPFKADHPLTTPPPKERTLQHIET 515

Query: 297 LIHHFKLFTEGFHVPAGETYTAIEAPKGEFGVYLVSDGTNKPYRCKIRAPGFAHLQGLDF 356
           LI+HF   + G  +PA E++  IEA KG    YL SDG+   YR +IR P FAHLQ +  
Sbjct: 516 LINHFLQVSWGPVMPAAESFQMIEATKGINSYYLTSDGSTMSYRTRIRTPSFAHLQQIPS 575

Query: 357 MSKGHMLADAVANIASMDIVFGEIDR 382
           + KG M++D +  + S+D V  ++DR
Sbjct: 576 VIKGSMVSDLIVYLGSIDFVMSDVDR 601