Pairwise Alignments

Query, 478 a.a., ATPase AAA from Azospirillum brasilense Sp245

Subject, 467 a.a., sigma-54 dependent DNA-binding response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  298 bits (764), Expect = 2e-85
 Identities = 169/403 (41%), Positives = 235/403 (58%), Gaps = 11/403 (2%)

Query: 8   ILLVEDTPSLARVYAEFLKKD--CTSVTTVETGAEALEQLADGAPRIVLLDLQLPDMHGM 65
           IL+V+D P  A   A  + +D    SV+   +GAEAL  +      ++L DL++PDM GM
Sbjct: 9   ILIVDDEPDFAHGLARLVSRDFPAASVSVALSGAEALHIIQGSGVALLLTDLRMPDMDGM 68

Query: 66  EVLKRISAQALPCAVIIITAHGSVGVAVEAMRYGAYDFLVKPFSAERLTVTVRNAMERLR 125
           E++++        +VI++TAHGS+  AV A++ GAYDFL KP   E L  T+  A+ER+R
Sbjct: 69  ELMQQAMTVDPTTSVILLTAHGSIETAVAALKNGAYDFLTKPVRREELQRTLNKALERIR 128

Query: 126 LAQLVDSFEKDLGRSRYHG-----FLGSSLAMQAVYRIIDSAASSRATVFITGESGTGKE 180
           + +      K L +    G      +G S  MQ +   I + A++  +V I GESGTGKE
Sbjct: 129 ILKE----NKRLRQMMQQGCIERQMIGESPVMQRLKETIAAIAATDYSVLIRGESGTGKE 184

Query: 181 VCAEAIHRQSPRADRPFIAINCGAIPKDLMESEIFGHMKGSFTGAVVDREGAAARANGGT 240
           + A+ +HR   R +RP + +NC +IP  L+ESE+FGH+KG+FTGA   R G    A  GT
Sbjct: 185 LVADMLHRLGSRRERPLVKVNCPSIPDQLLESELFGHVKGAFTGADRTRRGLFMSAQRGT 244

Query: 241 LFLDEICELAPDLQTKLLRFIQTGTFTPVGGSRLEKVDLRIICATNRDPLREVEEGRFRE 300
           L LDEI ++   LQTKLLR +Q     PVG S    VD+RII +TNR     +++G FRE
Sbjct: 245 LLLDEIGDIGEALQTKLLRVLQEREIRPVGSSASTLVDVRIIASTNRALEERIKQGLFRE 304

Query: 301 DLYYRLHVIPIHLPPLREREDDVLEICRQFLADYTREEGKGFVRFSPAAEQALRTYHWPG 360
           DL+YRL+V+ IH PPLRER DD+  +   F+A   RE      R SP A   L    WPG
Sbjct: 305 DLFYRLNVLTIHTPPLRERRDDIPLLADHFVAATCRELSSPVKRISPGALACLAGREWPG 364

Query: 361 NVRQVQNVVRNIVVLHDGDTVTPAMLPAPLGTPAGAAVASPAV 403
           NVR++QN +R +VV   GDT+  A L    GT       +P++
Sbjct: 365 NVRELQNYIRRLVVFCPGDTIDTAHLRLVDGTTCPTTAETPSL 407