Pairwise Alignments

Query, 298 a.a., transcriptional Regulator LysR family; putative Glycine cleavage system transcriptional activator (Gcv operon activator) from Azospirillum brasilense Sp245

Subject, 303 a.a., glycine cleavage system transcriptional activator, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  207 bits (528), Expect = 2e-58
 Identities = 125/300 (41%), Positives = 171/300 (57%), Gaps = 10/300 (3%)

Query: 1   MAYRLPPLNTLRLFEAAGRHQSFKAAAEELHLTPSAVSHGIQTLEDWLGVELFLRGNRSL 60
           M+ RLPPLN ++ FEAA RH SF  AAEEL +T +AVSH I+ LED+LG++LF R NRSL
Sbjct: 1   MSRRLPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSL 60

Query: 61  SLTPAGQTYLPRVRDALQSLALATESVPGRAPSGRLSVSAAPTFALRWLIPRLPAFQERH 120
            LT  GQ+Y   ++D    LA AT+ +  R+  G L+VS +P+FA++WL+PRL  F E++
Sbjct: 61  LLTEEGQSYFLDIKDIFIQLADATDRLLARSAIGSLTVSMSPSFAIQWLVPRLSKFSEKN 120

Query: 121 PAITVALDTAHRVVEFPRDGIDVGIRLGRGDWPGLAALKLMEEDLVPVAAPAL---AARI 177
           P I V +           D +DV I  G G+WPGL A KL  E L+PV +P L      +
Sbjct: 121 PEIDVRIKAVDTEASSLTDDVDVAIYYGLGNWPGLRADKLRNEVLIPVCSPMLLNGPKPL 180

Query: 178 ACPADLATVPLLHVADVS-EDWTAWAEAAGLPPSALDDGLKRGLRLDAIHMAVDAAVRGL 236
           + P DL    LLH  D+S  DW AW    G+     D  + +G       + + AA  G 
Sbjct: 181 SKPEDLKHHTLLH--DMSRHDWQAWFRQCGI----TDINVNQGPIFSHSSLVLQAAAHGQ 234

Query: 237 GVIIGRRPTIDPELASGQLVEVMGPRLRAKSAYWLVTAQDSLRRPEVAAFRSWMRAEFAQ 296
           GV +G      P++ +G+LV      L +K AY+LV  Q+     +V AFR WM   FA+
Sbjct: 235 GVALGYSVLARPDIKAGRLVCPFQEVLVSKDAYYLVCQQNHAELGKVVAFREWMLDMFAE 294