Pairwise Alignments

Query, 298 a.a., ABC transporter for Glycerol, permease component 1 (from data) from Acidovorax sp. GW101-3H11

Subject, 307 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  109 bits (273), Expect = 7e-29
 Identities = 73/277 (26%), Positives = 135/277 (48%), Gaps = 5/277 (1%)

Query: 13  WFLILPVIICVAFSAILPLMTVVNYSVQD--IISPERRVFVGTEWFAAVMRDEELHAALW 70
           + L LP ++ V    ++P  T V YS Q   +  P  R F   E +     D      L 
Sbjct: 23  YVLSLPALL-VCIGILIPFFTAVIYSFQRYRLSQPWARQFNWGENYLNFFTDPGFWNTLK 81

Query: 71  RQLTFSLAVLAVEIPLGILLALSMPAQGWKSSAVLVVVALSLLIPWNVVGTIWQIYGRAD 130
             L ++   + +E+ LG+ +AL +  +   ++ + +++ L L+    +   +W++     
Sbjct: 82  ISLLYAGVTVTLELLLGLGIALLLQRRSTVNNFISIMLLLPLMTAPALAALMWKLMTNPG 141

Query: 131 IGLMGRMLQEMGIE-YSYTGNATQAWLTVLLMDVWHWTPLVALLAFAGLRSIPDAYYQAA 189
            G++  +   +G+E + +  +   A LTV+L+D+W +TP + +L  AGLRS+P   ++AA
Sbjct: 142 FGILSYLASLVGLENFRWASSPDTALLTVVLVDIWVYTPFIMILLLAGLRSLPTQPFEAA 201

Query: 190 RIDGASKFAVFRYIQLPKMRGVLMIAVLLRFMDSFMIYTEPFVLTGGGPGNATTFLSQYL 249
            +DG  +  VF  I LP +   ++ A L R +DS   +   + +T GGPG+  T      
Sbjct: 202 ALDGVPRSFVFFRITLPMLTPYILTATLFRLLDSIQQFDIIYAMTQGGPGDTLTVFQVEA 261

Query: 250 TTKAVGQFDLGPAAAFSLIYFFIILLLCFI-LYNWMQ 285
                   ++G +AA  +I + I   L  I + NW++
Sbjct: 262 YLNFFQSTNVGRSAALLIILWAITYALSNIFIKNWLR 298