Pairwise Alignments

Query, 387 a.a., ABC-type multidrug transport system, permease component from Acidovorax sp. GW101-3H11

Subject, 393 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 72.0 bits (175), Expect = 3e-17
 Identities = 79/317 (24%), Positives = 134/317 (42%), Gaps = 18/317 (5%)

Query: 32  LLLLIGAPVLYGFFYPWFYADEVLTRVPVAVVDMDRTSLSRQITRFADADPRIEVRLVTG 91
           L  ++ AP+    F+       +   +P  VVDMD +S SR I R  DA  +  V     
Sbjct: 29  LFCMVIAPLFCYLFFTTLMDSGLPQNLPAGVVDMDDSSTSRNIVRNLDAFSQTGVVAHYS 88

Query: 92  SEHEAQQALWRGEIEGYAVIPPHLKRNVVRGENAVVSIEANGAYALLNKAVQFGFAEAVG 151
           +  +A+ A+  G+I G+  IP  L           +S   N +Y L+  ++ F   + +G
Sbjct: 89  NVTDARIAVQEGKIYGFFYIPKGLSAEAQSQRQPKISFYTNYSY-LIAGSLLFRDMKMMG 147

Query: 152 TVSAGVEIRK-LQASGQSALQARASRAPVQLQTVALFNPIEGYGSF----VVPAVALLIL 206
            ++AG   R  L A G +  QA     P+ + T  L NP   Y  +    ++P V +L++
Sbjct: 148 ELTAGSAARSVLYAKGATEDQAMGFLQPIVIDTHPLNNPWLNYSVYLCNTLIPGVLMLLI 207

Query: 207 QQTLLMGAAL-----LAGTWVEAGQHRASATTWLGRLLALSTLGWASGLFYFGWIFVLHD 261
               +    +      A  W+    + +      G+LL  + + +  G+FY  +++    
Sbjct: 208 FMVTVYSIGVEIKDRTAREWLRM-SNNSIYIALAGKLLPHTVVFFIMGIFYNVYLYGFLH 266

Query: 262 YPRGGNPLGALALLACYVPAIAALGSLLGLWFGNRERALQVLLFTTL--PIAF-VAGFSW 318
           +P        +    C V A    G ++    G        L F +L   I+F ++GFS+
Sbjct: 267 FPCNSGIFPMIFATLCLVLASQCCGIVM---IGTLPTLRLGLSFASLWGVISFSISGFSF 323

Query: 319 PVEALPEPLQWLRWLLP 335
           PV A+   LQ L  L P
Sbjct: 324 PVMAMNPVLQALSNLFP 340