Pairwise Alignments

Query, 868 a.a., DNA gyrase subunit B (EC 5.99.1.3) from Acidovorax sp. GW101-3H11

Subject, 805 a.a., DNA gyrase subunit GyrB from Phaeobacter inhibens DSM 17395

 Score =  771 bits (1990), Expect = 0.0
 Identities = 432/848 (50%), Positives = 553/848 (65%), Gaps = 60/848 (7%)

Query: 30  ASESYGEGSITILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVVDNSIDEALAGHCDDIV 89
           A   YG  SI +L+GLEAVRKRPGMYIGDT DG+GLHH+V+EVVDN IDEALAGH D +V
Sbjct: 7   APAEYGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAGHADRVV 66

Query: 90  VTIHTDNSISVTDNGRGIPTGVKMDDKHEPKRSAAEIALTELHAGGKFNQNSYKVSGGLH 149
           V IH D+S+SV DNGRGIP G+      E   SAAE+ +T+LHAGGKF+ NSYKVSGGLH
Sbjct: 67  VKIHADSSVSVNDNGRGIPVGIH----EEEGVSAAEVIMTQLHAGGKFDSNSYKVSGGLH 122

Query: 150 GVGVSCVNALSKWLRLTVRREGKVHQIEFARGFVQDRLLDKVDGFEVSPMKVTGET-EKR 208
           GVGVS VNALS WL L + R+GK H   F RG   + L            KV G+  ++ 
Sbjct: 123 GVGVSVVNALSDWLELRIWRDGKEHVARFERGDTAEHL------------KVVGDCGDQT 170

Query: 209 GTEVHFLPDTEIFKENYDFHYEILAKRLRELSFLNNGVRIRLKDERSGK--EDDFSGAGG 266
           GTEV FL  T+ F  N ++ +E L KRLREL+FLN+GVRI L DER  +  E +    GG
Sbjct: 171 GTEVRFLASTDTFS-NLEYLFETLEKRLRELAFLNSGVRIILIDERPAERLEVELFYEGG 229

Query: 267 VRGFVEFINKGKTVLHPTSFYAAGERPAETYGGIPGTHIGVEVSMQWNSAYTEQVLCFTN 326
           V+ FV+++++ K+ +     Y  G+R            IGVEV+M WN +Y E VL FTN
Sbjct: 230 VKEFVKYLDRSKSPVMEAPIYITGDRD----------EIGVEVAMWWNDSYHETVLPFTN 279

Query: 327 NIPQRDGGTHLTGLRAAMTRVINKYIEENELAKKAKVEVTGDDMREGLCCVLSVKVPEPK 386
           NIPQRDGGTH+ G R A+TR IN Y + + +AKK KV  TGDD REGL CVLSVKVP+PK
Sbjct: 280 NIPQRDGGTHVAGFRGALTRTINNYAQSSGIAKKEKVSFTGDDAREGLTCVLSVKVPDPK 339

Query: 387 FSSQTKDKLVSSEVRAPVEDIVGKLLTDYLQERPADAKIICGKIVEAARAREAARKAREM 446
           FSSQTKDKLVSSEVR  VE +V + L ++ +E P  AK I GKI+EAA AREAARKARE+
Sbjct: 340 FSSQTKDKLVSSEVRPVVESLVNEKLAEWFEENPNQAKQIVGKIIEAALAREAARKAREL 399

Query: 447 TRRKGVLDGMGLPGKLADCQEKDPAMCEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKIL 506
           TRRK  +D   L GKL DC EKDP+  E+++VEGDSAGGSA+ GRDR  QAILPLRGKIL
Sbjct: 400 TRRKTAMDVNYLAGKLKDCSEKDPSKTEVFLVEGDSAGGSAQTGRDRMTQAILPLRGKIL 459

Query: 507 NVEKARYEKLLTSNEILTLITALGTGIGKAGGTTGGDDFDVAKLRYHRIIIMTDADVDGA 566
           NVE+AR++++L S EI  L+ ALGTGIG+       D+F++ KLRYH+I+IMTDADVDGA
Sbjct: 460 NVERARFDRMLGSQEIGNLVMALGTGIGR-------DEFNIDKLRYHKIVIMTDADVDGA 512

Query: 567 HIRTLLLTFFYRQMPELVERGHIYIAQPPLYKVKAGKEELYLKDGPALDGFLLRIALNHA 626
           HIRTLLLTFFYRQMPEL+E G++YIAQPPLYKV  GK E+YLKD  ALD +L+   ++ A
Sbjct: 513 HIRTLLLTFFYRQMPELIEGGYLYIAQPPLYKVSRGKSEVYLKDQAALDEYLINQGVDGA 572

Query: 627 SVSTGGANPQVLAGDTLAELARKHQVAESVI-----HRLSNFMDQEALRA--VADGVSLK 679
            +  G    + L G  LA +  + +  + V+     H   + ++Q A+    V   V   
Sbjct: 573 VLKLGSG--EELVGQDLARVVDEARQLKRVLDAFPTHYPRHILEQAAVAGAFVPGAVDAD 630

Query: 680 LDTVAEAEASAVALQIKLRELNTTGTPAEVAGEFDARTDKPILRISRRHHGNVKSSVITQ 739
           L  VA+  A  + L     E    G   +  G          +R+SR   G  +   +  
Sbjct: 631 LQGVADKVAQRLDLIALEYERGWRGRITQDHG----------IRLSRILRGVEELRTLDG 680

Query: 740 DFVHGADYAALAEAADTFRGLLGEGAKALRGEGDKQKEEKVGDFRQAMKWLISEAERTTS 799
             +   +        ++ +   G  A  +R +  +     +G     +K ++ E E+  +
Sbjct: 681 PMLRSGEARKTGSFTNSLQETYGATATLVRRDRSQAIHGPLG----LLKAILEEGEKGLA 736

Query: 800 RQRYKGLGEMNPEQLWETTMDPNVRRLLRVQIDDAIEADRVFTMLMGDEVEPRRDFIETN 859
            QRYKGLGEMNP+QLWETT+DP+ R LL+V+++D +EAD +FT LMGD VEPRR+FI+ N
Sbjct: 737 LQRYKGLGEMNPDQLWETTLDPDARTLLQVRVEDMVEADDLFTKLMGDVVEPRREFIQKN 796

Query: 860 ALRAGNID 867
           AL   N+D
Sbjct: 797 ALSVENLD 804