Pairwise Alignments

Query, 1623 a.a., Sensory box histidine kinase/response regulator from Acidovorax sp. GW101-3H11

Subject, 1287 a.a., signal transduction histidine kinase-like protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  427 bits (1099), Expect = e-123
 Identities = 309/810 (38%), Positives = 440/810 (54%), Gaps = 51/810 (6%)

Query: 832  GTIGTFVDITDRQRAEQELRRAKELAEESTALKSNFLANMSHEIRTPMNAIIGMSHLALK 891
            G +G   D+T++ + EQEL  A+E A +++  KS+FLANMSHEIRTPMNA++G+  + L+
Sbjct: 505  GYLGIAYDLTEQLKREQELADAREQALQASRAKSDFLANMSHEIRTPMNAVLGLLQMTLQ 564

Query: 892  SGLSPRQHDYVSKIQQAGQHLLGVINDILDFSKIEAGKLVVERQPFLLDRMLESVSDVVG 951
            + L PR  DY+ K QQA + LL ++NDILDFSKIEAG++ +ERQ F L ++L  +  ++ 
Sbjct: 565  TELPPRPRDYLEKTQQAAKSLLALLNDILDFSKIEAGRIELERQGFSLQQLLGDMGSILS 624

Query: 952  YKAGAKGLELVCDVAADVPPNLVGDALRLGQILINFANNAIKFTESGEISIAVRLLAEAG 1011
             +   K +ELV  VA  VP  L+GD+LRL QIL+N   NAIKFTE G+  I  R+ A+ G
Sbjct: 625  SQVQQKDIELVYQVAPSVPDQLIGDSLRLRQILLNVLTNAIKFTEKGD--IITRIDADLG 682

Query: 1012 QQ--VRLRFEVRDTGIGLTEEQMGRLFQSFQQADTSTTRRYGGTGLGLAICKSLAELMGG 1069
                  L  E++D+GIG+T EQ   +F+ F QAD+S +RRYGGTGLGLAI + L  LM G
Sbjct: 683  DDGTCHLHIEIQDSGIGMTNEQQAIIFKGFSQADSSISRRYGGTGLGLAITRELVHLMQG 742

Query: 1070 EVGVESVFGQGSTFWVAVPLERGAAARVLLPPPDLRGSRVLVVDDNHTAATVLSDMLHAM 1129
            E+ V S  G GSTF + V L  G  A    P     G RVL+V+DNHT+  V S++L  +
Sbjct: 743  EIRVTSSPGVGSTFTIDVQL--GFDATKYRPGARFSGVRVLLVEDNHTSRLVFSELLRDL 800

Query: 1130 GFEVEQAHSGLEALDRLRESMAQHKPFGLLLLDWHMPGMDGVELAGHIRSL-GMAKVPQM 1188
            G EV   ++GL A+  + E MA    F +LL DW +PG+DG+ELA  IR L  +++ P +
Sbjct: 801  GCEVTALNNGLTAMKTI-ERMAPDS-FDVLLADWQLPGLDGLELASWIRHLDSLSRQPGI 858

Query: 1189 LMVTAYGRE--DVMRAARAQGIETVLIKPVNASVLFDTLMQPLEHSTAAGRRTVSPAPAA 1246
            ++VTA+ +   +     R +  +  LIKPV   ++   L   LE     G   +S  P A
Sbjct: 859  IIVTAFSQAMLEAQLKHREEEFDATLIKPVTREMVSRCLQSVLERHNNDGLDMLSHLPLA 918

Query: 1247 DELPLEIRGAQVLLVEDNELNQMVAMELLLDAGFAVDVAENGQIAIDRIERKHYDAVLMD 1306
              L     G ++LLVEDN  N++VA  LL   G  V  A +G  A+  + R+ +D VLMD
Sbjct: 919  PSLV----GRRLLLVEDNATNRLVATSLLGQLGAEVIEAVDGFQALKLLSRQQFDLVLMD 974

Query: 1307 MQMPVMDGETATRALRSNPRHAQLPIIAMTANAMEADRQRCFAAGMNDHVAKPIEPAALW 1366
            +QMP MDG   TR +R+      LPIIAMTANAM  D+Q C  AGMN H++KP E   + 
Sbjct: 975  IQMPGMDGYQTTRKIRNELMLTDLPIIAMTANAMPEDKQACRDAGMNCHISKPFEIDEVA 1034

Query: 1367 AALGRWI----RPRAGLGAAAAQAGVPSG--RTGEDAALLPLTRKPDLPPPSV-PLPTVA 1419
              L +++     P     A A      +G      +AA+  +    D  P SV       
Sbjct: 1035 TKLLQYLSPPEHPMRSSEALAEDESTSAGSLTAAPEAAVTEMHNPKDALPQSVRQFSQAN 1094

Query: 1420 GLDTALGLQRALGKPGLYVELLRRFAEGQAPVLAELQQALAANNLGV--AERLAHTLRSV 1477
            GLD      R LG   L+  ++ +F       +++ Q+ L+   + +  A    H+L+S 
Sbjct: 1095 GLDLEEACNR-LGDRELFTRVIDQFLLD----ISQAQRCLSVPEIAMKDARIQYHSLKSG 1149

Query: 1478 AANIGAPAVSERAQALEHALRFRHGNEAIVHVLAELRAALVPLLAGLQAWLVESVVVAEP 1537
            AA+ G  A+   A  L +A       EA     AELR A  P  A L+A L E++   E 
Sbjct: 1150 AASCGFTAL---ALVLRNA-------EANCRPEAELRVA--PDEAVLRA-LPEAISQLEQ 1196

Query: 1538 APFVREP----GGALAVDGAAQA-----VQRLRHLLEQDDPAATEFFQHNGKTLGAALGS 1588
               +  P    G A + +   QA     +  L+ LL Q D AA +   +  + L     +
Sbjct: 1197 LQPLLSPQVQSGAAASQNLLPQAELSAQLITLQQLLSQSDMAALDLLANLREPLAELDAA 1256

Query: 1589 LFKTVEMHTLNFDFEQALEAMAAVPGSESL 1618
            L   +     N DF Q+L  ++A  G E +
Sbjct: 1257 LTGKLVDAANNLDFNQSLVLLSAFEGLERI 1286



 Score = 32.7 bits (73), Expect = 3e-04
 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%)

Query: 452 VSARIEAQKELERRERLLNELLEQQTAIFDNAPPIVLVCD--GHFRQFNPAFVELMGGTA 509
           +SA+ + ++ +  R   L ++   Q  I D A   ++  D  G    FNP+   L+G TA
Sbjct: 364 LSAKAKLEQLVHERTSQLEKMGVLQRTILDAASYAIIATDTEGIITVFNPSAERLLGFTA 423

Query: 510 SQLLGLGVSVLF 521
            +++GL    +F
Sbjct: 424 KEMVGLQTPAIF 435



 Score = 32.3 bits (72), Expect = 4e-04
 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 335 SALERFRLLGAA-LESSPVSVVITDGEGYIDWVNPQFERNTGYTLEEVRG 383
           S LE+  +L    L+++  +++ TD EG I   NP  ER  G+T +E+ G
Sbjct: 379 SQLEKMGVLQRTILDAASYAIIATDTEGIITVFNPSAERLLGFTAKEMVG 428