Pairwise Alignments
Query, 1623 a.a., Sensory box histidine kinase/response regulator from Acidovorax sp. GW101-3H11
Subject, 839 a.a., PAS domain S-box from Dechlorosoma suillum PS
Score = 317 bits (812), Expect = 4e-90
Identities = 204/528 (38%), Positives = 284/528 (53%), Gaps = 39/528 (7%)
Query: 732 LIDAIPVPLFYKGADGRYVGVNRAYEQAFGVERETLVGKTVMDLEFLPHASRVLFERDNA 791
L+ IP PL+ K G ++ N A+E+ G + ++G + D +F+ F +
Sbjct: 309 LLRGIPDPLWLKDEAGVFIACNPAFERMMGRPEQEIIGCS--DYDFVSREQADFFRDKDR 366
Query: 792 LVLAGGQSVHREVDLPYADGEMHHTLFWLHG-FRRADGSPGGTIGTFVDITDRQRAE--- 847
VL G E + ADG + G G +G DIT+R+R E
Sbjct: 367 QVLVAGTPQSNEEWITQADGSGQRLFETVKTPIVEPQGKVLGVLGVARDITERKRLEAEV 426
Query: 848 ---------------QELRRAKELAEESTALKSNFLANMSHEIRTPMNAIIGMSHLALKS 892
+EL RA++ A + KS FLANMSHEIRTPMNAIIG++H+ K
Sbjct: 427 SNYSHHLEELVAERTEELARARDAANAANVAKSAFLANMSHEIRTPMNAIIGLTHILKKG 486
Query: 893 GLSPRQHDYVSKIQQAGQHLLGVINDILDFSKIEAGKLVVERQPFLLDRMLESVSDVVGY 952
SP+Q D + KI A HLL +INDILD SKIEA +LV+E QP L R++ + ++
Sbjct: 487 EPSPQQQDRLDKIDDAASHLLSIINDILDLSKIEAERLVLEEQPVELGRIVSHIFSMLAE 546
Query: 953 KAGAKGLELVCDVAADVPPNLVGDALRLGQILINFANNAIKFTESGEISIAVRLLAEAGQ 1012
A K + L +V +PP L+GD RL Q ++N+A+NA+KFTE G +++ +++L
Sbjct: 547 GARKKDIVLKSEVDP-LPPYLLGDPTRLTQAILNYASNAVKFTEWGSVTLRIKVLELTPA 605
Query: 1013 QVRLRFEVRDTGIGLTEEQMGRLFQSFQQADTSTTRRYGGTGLGLAICKSLAELMGGEVG 1072
V LRFEV DTGIG+ E LF FQQAD ST+RR+GGTGLGL I + LA++MGG+ G
Sbjct: 606 DVFLRFEVEDTGIGIAPEVQPLLFAPFQQADGSTSRRFGGTGLGLVITRRLAQIMGGDAG 665
Query: 1073 VESVFGQGSTFWVAVPLERGAAARVLL---PPPD---------LRGSRVLVVDDNHTAAT 1120
V+S G GSTFW + L+ G A L P PD RG+ +L+ +D+
Sbjct: 666 VDSRLGFGSTFWFSARLKLGEARAALPEDGPRPDSAEGELLQHYRGTPILLAEDDSINQE 725
Query: 1121 VLSDMLHAMGFEVEQAHSGLEALDRLRESMAQHKPFGLLLLDWHMPGMDGVELAGHIRSL 1180
V ++L G V+ A G EA+ L P+ L+L+D MPGMDG+E HIR L
Sbjct: 726 VARELLEYAGLRVDIAADGNEAVACLERGTT---PYALVLMDMQMPGMDGLEATRHIRRL 782
Query: 1181 -GMAKVPQMLMVTAYGREDVMRAARAQGIETVLIKPVNASVLFDTLMQ 1227
GM +P + M ED R A G+ + KPVN VL+ L++
Sbjct: 783 PGMESLPIISMTANAFGEDRERCLEA-GMNDFVPKPVNPEVLYAMLLK 829
Score = 123 bits (308), Expect = 1e-31
Identities = 71/138 (51%), Positives = 86/138 (62%), Gaps = 3/138 (2%)
Query: 1242 PAPAADELPLEIRGAQVLLVEDNELNQMVAMELLLDAGFAVDVAENGQIAIDRIER--KH 1299
P A EL RG +LL ED+ +NQ VA ELL AG VD+A +G A+ +ER
Sbjct: 698 PDSAEGELLQHYRGTPILLAEDDSINQEVARELLEYAGLRVDIAADGNEAVACLERGTTP 757
Query: 1300 YDAVLMDMQMPVMDGETATRALRSNPRHAQLPIIAMTANAMEADRQRCFAAGMNDHVAKP 1359
Y VLMDMQMP MDG ATR +R P LPII+MTANA DR+RC AGMND V KP
Sbjct: 758 YALVLMDMQMPGMDGLEATRHIRRLPGMESLPIISMTANAFGEDRERCLEAGMNDFVPKP 817
Query: 1360 IEPAALWAALGRWI-RPR 1376
+ P L+A L +W+ RP+
Sbjct: 818 VNPEVLYAMLLKWLPRPQ 835
Score = 39.3 bits (90), Expect = 2e-06
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 2/170 (1%)
Query: 310 AVAFVAISLLGLLLLDLLRSRARVASALERFRL-LGAALESSPVSVVITDGEGYIDWVNP 368
A+ VA + L L + L + R + LER R L L P + + D G NP
Sbjct: 272 ALLLVAGAGLALWVRVLQAAVKRRTAELERQRSHLHTLLRGIPDPLWLKDEAGVFIACNP 331
Query: 369 QFERNTGYTLEEVRGKKPSLVSSGQTPAQTYQVMWSALLSGQSWQGHFVNRRKDGSTYH- 427
FER G +E+ G S + L++G + DGS
Sbjct: 332 AFERMMGRPEQEIIGCSDYDFVSREQADFFRDKDRQVLVAGTPQSNEEWITQADGSGQRL 391
Query: 428 DEATLSPVFDGKGRRIGIVGLHEDVSARIEAQKELERRERLLNELLEQQT 477
E +P+ + +G+ +G++G+ D++ R + E+ L EL+ ++T
Sbjct: 392 FETVKTPIVEPQGKVLGVLGVARDITERKRLEAEVSNYSHHLEELVAERT 441
Score = 27.7 bits (60), Expect = 0.006
Identities = 34/145 (23%), Positives = 56/145 (38%), Gaps = 12/145 (8%)
Query: 461 ELERRERLLNELLEQQTAIFDNAPPIVLVCD--GHFRQFNPAFVELMGGTASQLLGLGVS 518
ELER+ L+ LL P + + D G F NPAF +MG +++G
Sbjct: 298 ELERQRSHLHTLLR-------GIPDPLWLKDEAGVFIACNPAFERMMGRPEQEIIGCS-D 349
Query: 519 VLFGGPGHSDLFTARVAPSLAAGQALRETATLFRLDGS--RFEARLAGRSLKMDDFGAAS 576
F +D F + L AG + + DGS R + ++
Sbjct: 350 YDFVSREQADFFRDKDRQVLVAGTPQSNEEWITQADGSGQRLFETVKTPIVEPQGKVLGV 409
Query: 577 IWVIEDVSDQRRAELAIQQTKERLE 601
+ V D+++++R E + LE
Sbjct: 410 LGVARDITERKRLEAEVSNYSHHLE 434