Pairwise Alignments

Query, 335 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Acidovorax sp. GW101-3H11

Subject, 365 a.a., TRAP dicarboxylate transporter, DctP subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  161 bits (407), Expect = 3e-44
 Identities = 112/336 (33%), Positives = 172/336 (51%), Gaps = 16/336 (4%)

Query: 7   ALAATL---LAALAAPV------AAQVKEHTFKVGIGLSDDHPQAQAVRHFAERLQAKSG 57
           ALAA+L   LA LAA +      A+   E T  + +  +    Q      F + L+ +S 
Sbjct: 32  ALAASLGLMLACLAAILPGWPRTASAATELT--LAVVTTPGSAQHVCAERFRQLLEERSH 89

Query: 58  GKMNAKLFASGALGNDVSMTSALRGGTLEMTIPDSSTLMSLIKPFGVLNLPLTFNTEAEA 117
           G     +  SG LG +  +   L+ G +++ I     L   +    VL+ P  F   AEA
Sbjct: 90  GAYRVVVHHSGTLGTETEILQQLQLGGVQLAIITLGVLDPFVPEVKVLDYPFLFRDAAEA 149

Query: 118 DALLDGPFGQKLLAMLPDKGLIGLGFWENGFRHVTNSRRAINTADDLAGLKLRVIQSPLF 177
           D +LDG  G+ LL  L   GL GL F ENGFRH+TN+ R + + DD+ GLK+RV++S L 
Sbjct: 150 DRVLDGATGRALLDALERVGLKGLHFSENGFRHLTNNVRPVRSVDDVRGLKIRVLESTLH 209

Query: 178 LDTFSALGTNATPMPFTELYTAMEQKAVDGQENPPATILASKFYEVQKHLVLSRHMYSAW 237
            + + ALG N TPM +  +Y  ++Q  +DGQENP   +   +  EVQK+L L+ H+YSA 
Sbjct: 210 RELWRALGANPTPMGW-PIYAELQQGTIDGQENPLWVMAEYRMPEVQKYLSLTGHVYSAH 268

Query: 238 VLLISKKTWDGLSADERKIVQEAAREATLFERKTIRAFSQTALGELKKAGMQITELPAAE 297
             L +   ++GL   ER +V +   +A  ++R   R      L  L++AGMQ+ + P  +
Sbjct: 269 ADLANLAWFNGLPPAERTLVMQCMADAAAYQRAYNRQKDADYLRRLREAGMQVVDAP--D 326

Query: 298 QAKLRTKLQPVLAKYGKEFGEETTSEMMGELAKARG 333
            A  R +   +  +    F +  T +M+  +  A G
Sbjct: 327 LASFRARADAL--RQSSLFSDPRTRDMLARVLAAVG 360