Pairwise Alignments

Query, 678 a.a., DNA ligase (EC 6.5.1.2) from Acidovorax sp. GW101-3H11

Subject, 808 a.a., DNA ligase, NAD-dependent (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  557 bits (1435), Expect = e-163
 Identities = 324/696 (46%), Positives = 429/696 (61%), Gaps = 32/696 (4%)

Query: 2   ALALRAQLNHWAHQYYVLDEPTVPDAEYDRVFRELQALEAAHPDLVTPDSPTQRVIGAVM 61
           A ALR QLN+ +H+YYVLD+  + DAEYD +FRELQ +EA  P L TPDSPT RV   V+
Sbjct: 37  AEALRDQLNYHSHRYYVLDDAEISDAEYDALFRELQDIEAEWPSLRTPDSPTHRVGDTVV 96

Query: 62  EGLAPVRHTVPMLSIHTETDTEATGAQAFDARVRRELGLADADPAIEYVAEPKFDGLAMS 121
             L    HT+ M S+       A  A+ +D  ++R L  A+ D    +  +PK DGLA+ 
Sbjct: 97  AALETQAHTLRMYSLDN-----AFSAEEWDGFIQRMLR-AEPDAPTAFWCDPKMDGLALE 150

Query: 122 LRYENGRLVQAATRGDGEVGEDVTHNIRTIRQIPLTL--PSGVPPLLEVRGEVYMRRADF 179
           + YENG    A TRGDGE GE VT  +RT+R +PL L      P  LEVRGEV + RA+F
Sbjct: 151 VIYENGVFTTALTRGDGEKGEIVTTAMRTVRNLPLRLHGEGPHPARLEVRGEVVITRAEF 210

Query: 180 DALNERQREQGGKTFVNPRNAAAGAVRQLDSNITAQRPLSFFAYGLGAITPPAEG----- 234
           DALN  +R  G K F NPRNAAAG+VRQLD+++TA RPL F AYG+G +  PAE      
Sbjct: 211 DALNAARRGAGEKLFANPRNAAAGSVRQLDASVTAGRPLRFLAYGVGQVVWPAETSDGAA 270

Query: 235 ----GPVFR--THYEMLQTLKSWGFPVATQVQIAVDATELVAFHQQVGASRDALPYDIDG 288
               GP  R  TH +++  L  +GF      +      +++A+++ +G  R  LP+DIDG
Sbjct: 271 SAAQGPEARWATHGQVMAALADYGFGTPPDARRCETPAQVMAYYEDLGRRRSELPFDIDG 330

Query: 289 VVYKVNSLQLQRDLGFKTREPRWAVAHKYPAQEMATKIEGIDVQVGRTGKITPVARLAPV 348
           VV K++ L  Q  LG+  R PRWA+A K+PA +  T++E I +QVGRTG +TPVA LAPV
Sbjct: 331 VVAKLDDLSAQAALGYTARAPRWAIALKFPAHQATTRLEHIAIQVGRTGVLTPVAELAPV 390

Query: 349 FVGGVTVTNATLHNLFEIRKKGVRVGDTVIVRRAGDVIPEVVGVMPGNR-TGYVPNFQMP 407
            VGGVTV+ ATLHN  EIR K +RVGD V+V+RAGDVIPEVV  +   R    +P F+ P
Sbjct: 391 AVGGVTVSRATLHNEDEIRAKDLRVGDMVVVQRAGDVIPEVVRPLVDQRPASGLPEFEFP 450

Query: 408 TACPVCGSAVVREKGEANHRCTGGLFCAAQRKEAILHFAARRAMDIEGLGDKLVDQLVDA 467
             CPVC + V RE GEA  RC   + C A  +++I+HF ++  +DI+G+G + V+ LVD 
Sbjct: 451 AECPVCHTPVRREPGEAAWRCV-NVGCPAVVRQSIIHFVSKAGLDIQGVGRRWVELLVDR 509

Query: 468 NVIRTLPDLYRLGLTSLIALERMAEKSAQNVLAALEKSKQ-TTLPRFLFGLGLRHVGEAT 526
             + +  DL+ L   +L+A ERM  K A+N +AA + ++   TL R +  LG+RHVGE T
Sbjct: 510 GKVTSPADLFGLDKQTLLAFERMGPKLAENFIAAFDTARTGATLNRLICALGIRHVGEQT 569

Query: 527 AKDLAKHFGTLDAIMDASVEQLLEVNDVGPVVAQSLHTFFAQPHNREVVEQLRACGVTWP 586
           A+ LA HF  LDA+  A  E L ++ D+GP VA S+  FFA   NR ++E+LR  G+ WP
Sbjct: 570 ARTLAAHFADLDALGAAQAETLQQLPDIGPEVAASIRAFFANEGNRALLERLRGVGL-WP 628

Query: 587 EGPVAERAPQI---------LAGKTVVLTGTLPTLSREAAKDMLEAAGAKVAGSVSKKTS 637
             PV   A            LAG  V+ TG+L TL+R  A+    AAGA + GSVSKK  
Sbjct: 629 VRPVRPEADAAGAPGEGSGPLAGLRVLFTGSLTTLTRSDAERRAVAAGANILGSVSKKLD 688

Query: 638 YVVAGAEAGSKLAKAEELGVPVLDEAGMLALLSGAG 673
            +V G + GSKL KA +LG+ VL E   L LL G G
Sbjct: 689 LLVVGDKPGSKLDKATKLGIRVLREQEFLDLLEGRG 724