Pairwise Alignments

Query, 678 a.a., DNA ligase (EC 6.5.1.2) from Acidovorax sp. GW101-3H11

Subject, 691 a.a., DNA ligase, NAD-dependent (RefSeq) from Shewanella sp. ANA-3

 Score =  680 bits (1755), Expect = 0.0
 Identities = 356/668 (53%), Positives = 464/668 (69%), Gaps = 11/668 (1%)

Query: 4   ALRAQLNHWAHQYYVLDEPTVPDAEYDRVFRELQALEAAHPDLVTPDSPTQRVIGAVMEG 63
           AL   LN    +YYV D P++ D+EYDR+ + L+ LEA +P  V  DSPTQRV G  +  
Sbjct: 31  ALCQSLNEHNIRYYVDDAPSITDSEYDRLMQRLKQLEAEYPQFVAADSPTQRVGGMALAK 90

Query: 64  LAPVRHTVPMLSIHTETDTEATGAQAFDARVRRELGLADADPAIEYVAEPKFDGLAMSLR 123
              + H  PMLS+    D       AF  RV   +G       + +  EPK DGLA+S+ 
Sbjct: 91  FEQITHLKPMLSLDNAFDE--ADFSAFHKRVSDRVG------EVSFCCEPKLDGLAVSIL 142

Query: 124 YENGRLVQAATRGDGEVGEDVTHNIRTIRQIPLTLPS-GVPPLLEVRGEVYMRRADFDAL 182
           Y NG L +AATRGDG VGED+T N++TI+ IPL L     P L+EVRGE +M +A F+AL
Sbjct: 143 YRNGVLERAATRGDGTVGEDITENVKTIKSIPLKLRGDNYPELVEVRGEAFMPKAAFEAL 202

Query: 183 NERQREQGGKTFVNPRNAAAGAVRQLDSNITAQRPLSFFAYGLGAITPPAEGGPVFRTHY 242
           NER R +  K FVNPRNAAAG++RQLDS ITA R LSF+AY LG + P +    + +THY
Sbjct: 203 NERARLKDEKLFVNPRNAAAGSLRQLDSKITASRALSFYAYALGVVEPTSH--ELAKTHY 260

Query: 243 EMLQTLKSWGFPVATQVQIAVDATELVAFHQQVGASRDALPYDIDGVVYKVNSLQLQRDL 302
           E LQ LKSWG PV++++++  + +++ A++Q +   R  LP++IDGVV KVN +  Q+ L
Sbjct: 261 EQLQQLKSWGLPVSSEIKVCDELSQVFAYYQDILTRRADLPFEIDGVVMKVNDIAQQQTL 320

Query: 303 GFKTREPRWAVAHKYPAQEMATKIEGIDVQVGRTGKITPVARLAPVFVGGVTVTNATLHN 362
           GF  + PRWA+A+K+PAQE  T +EG+D QVGRTG +TPVARL PVFVGGVTV+NATLHN
Sbjct: 321 GFVAKSPRWAIAYKFPAQEEMTLLEGVDFQVGRTGAVTPVARLKPVFVGGVTVSNATLHN 380

Query: 363 LFEIRKKGVRVGDTVIVRRAGDVIPEVVGVMPGNRTGYVPNFQMPTACPVCGSAVVREKG 422
             EI + GV VGDTVI+RRAGDVIP++V ++P  R         P  CPVCGS V R +G
Sbjct: 381 ADEIARLGVMVGDTVIIRRAGDVIPQIVAIVPERRPEDAKAIAFPQHCPVCGSLVERLEG 440

Query: 423 EANHRCTGGLFCAAQRKEAILHFAARRAMDIEGLGDKLVDQLVDANVIRTLPDLYRLGLT 482
           EA  RC+GGLFC AQRKEAI HFA+R+A+DI+G+GDK+V+QL+D  ++++  DL++L  +
Sbjct: 441 EAVARCSGGLFCEAQRKEAIKHFASRKALDIDGMGDKIVEQLIDKELVQSPADLFKLTAS 500

Query: 483 SLIALERMAEKSAQNVLAALEKSKQTTLPRFLFGLGLRHVGEATAKDLAKHFGTLDAIMD 542
            +  L+RM  KSA N+  A+E +K TTLPRFL+ LG+R VGE TA +LA HFG+L+A+  
Sbjct: 501 MMTMLDRMGIKSATNLALAIEAAKTTTLPRFLYALGIREVGETTAANLATHFGSLEALRV 560

Query: 543 ASVEQLLEVNDVGPVVAQSLHTFFAQPHNREVVEQLRACGVTWPEGPVAERAPQILAGKT 602
           A++EQL++V D+G VVAQ +  FFAQPHN EV++ L A GV WP         Q L G+T
Sbjct: 561 ATIEQLIQVEDIGEVVAQHVAHFFAQPHNLEVIDALIAAGVNWPAIAAPSADEQPLKGQT 620

Query: 603 VVLTGTLPTLSREAAKDMLEAAGAKVAGSVSKKTSYVVAGAEAGSKLAKAEELGVPVLDE 662
            VLTGTL  L+R  AK  L+A GAKVAGSVSK T  +VAG  AGSKLAKA+ELGV V+ E
Sbjct: 621 WVLTGTLNQLNRNDAKAQLQALGAKVAGSVSKNTDCLVAGEAAGSKLAKAQELGVKVIGE 680

Query: 663 AGMLALLS 670
             +LALL+
Sbjct: 681 DELLALLA 688