Pairwise Alignments

Query, 444 a.a., Type I secretion outer membrane protein, TolC precursor from Acidovorax sp. GW101-3H11

Subject, 432 a.a., outer membrane channel protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  216 bits (551), Expect = 9e-61
 Identities = 150/431 (34%), Positives = 218/431 (50%), Gaps = 16/431 (3%)

Query: 13  SLALGAALTAPA---QAQSLLELVESARTYDTAWQSARAQLDAAGRKADQARAGLLPSAA 69
           SL    AL A A   QA  LL++ + A T D     A+AQ +A   + ++ RA LLP+ +
Sbjct: 7   SLCAAIALAASASSVQADDLLQIYQQALTNDPLVLQAQAQRNALYAQIEENRAPLLPTIS 66

Query: 70  LTGGLTRSNVELSRPKIENTGTAQTVGINASQPLYRPANRINLEQGQRGVDVAQAQLDGA 129
              G  ++  + S      TG     G+  +Q +Y  +  + L   ++    A A    A
Sbjct: 67  ANVGYDKAWKDPSEDSDGFTG-----GVKLTQVIYDHSAWVGLSLAEKAAAQADAAYASA 121

Query: 130 TQDLLVRVSQAYFDVLAAQDTLTFVQAQKAAVSEQLASAKRNFEVGTTTVTDSREAQARY 189
            Q+L+ RV++AYFDVL A+D   F  A+K A+  QL   K+ F VG T +TD  EAQA+Y
Sbjct: 122 LQNLITRVTKAYFDVLKAKDNYEFQGAEKRAIERQLEQTKQRFAVGLTAMTDVHEAQAQY 181

Query: 190 DLVIAQEIAAENDLRVKRLALDQLVGITGTQPRPLALP-LQLPSVQPANVATWVDTARDQ 248
           DL  A EI AEN L     AL ++ GI       L        +  PA    W+  A + 
Sbjct: 182 DLASATEILAENTLSNSYEALREITGIDHKSINVLDTNRFSAAAPAPAAPNEWIKMAENN 241

Query: 249 QPGVRQAAIALDIARLETKKAETGHLPTVDLQAGYNVTRNLNGTISAPGVTNRSNAASVG 308
              +    I  DIA       + GH P++ L AGY       G    PG    ++  S+G
Sbjct: 242 STDLLTQRIGKDIAEETISLYKAGHYPSLSLSAGYT-----KGFEQTPGPDYDNS--SIG 294

Query: 309 VALNLPLFAGFAVQNRVKETLALEEKATADLETTRRNVAQATRAAFFGVQSGQGQVQALE 368
           V L++P+F GF V ++V++      +A+  LE T R V +  R  F  V +    ++A E
Sbjct: 295 VTLSIPIFEGFKVTSKVEQAQYKYVEASEKLEQTYRRVVKDVRNNFNNVGASISSIRAYE 354

Query: 369 AAEASSQSALDANKLGYQVGVRINIDVLNAQSQLFQTKRDLAQARYNVLLGTLKLRQAAG 428
            +  SS+SAL A + G++VG R  +DVLN    L+ +KR L+ ARY+ +   L L+QAAG
Sbjct: 355 QSVLSSESALGATQSGFEVGTRTIVDVLNRTRDLYDSKRKLSDARYSYISSVLALKQAAG 414

Query: 429 TLTQQDVEAIN 439
           TL + DV AIN
Sbjct: 415 TLNEDDVIAIN 425