Pairwise Alignments

Query, 348 a.a., Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) from Acidovorax sp. GW101-3H11

Subject, 333 a.a., oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  304 bits (779), Expect = 2e-87
 Identities = 159/330 (48%), Positives = 219/330 (66%), Gaps = 14/330 (4%)

Query: 14  LLEVKNLVVEFPGRRGTLRALDDISFSIAPGEILGVVGESGAGKSLTGAAIIGLLEPPGR 73
           LL+V NL V+F  R   L A++D+SF++A GE LG+VGESGAGKS+TG +I+ L+  PG 
Sbjct: 4   LLDVSNLTVKFALRDTALTAVNDVSFTLAKGERLGLVGESGAGKSVTGFSILNLVSKPGF 63

Query: 74  VASGQILLEGQRIDNLSNEEMRHIRGRRIGAIFQDPLTSLNPLYTVGRQLTETILAHLPV 133
           +A G +L EG+ +     E +R IRG RI  IFQDP+ +LNP+ TVG Q+ ETILAH  V
Sbjct: 64  IAGGSVLFEGKDLTRADAETLRDIRGNRISMIFQDPMMTLNPVLTVGTQMIETILAHKKV 123

Query: 134 TPAEARQRAIALLKDTGIPAAEERIDHYPHQFSGGMRQRVVIALALAAEPKLIVADEPTT 193
           T  EA   A+  L+   IP+ E R+  YPH+FSGGMRQR+VIA+AL   P LI+ADEPTT
Sbjct: 124 TRKEAEAIALDKLRKVYIPSPERRLAQYPHEFSGGMRQRIVIAIALLTSPSLIIADEPTT 183

Query: 194 ALDVSIQAQIITLLKNICKSRGAAVMLITHDMGVIAETCDRVAVLYAGRVAEIGPVHDVI 253
           ALDV+IQA+I+ LL  +C+S    ++LITHD+GV+++   ++AV+YAG + E+G    V+
Sbjct: 184 ALDVTIQAEIMDLLLELCQSEDMGLILITHDLGVVSQVTQKIAVMYAGGIVEMGDTAMVV 243

Query: 254 NKPSHPYTSGLMASIP------DMTMD-------RERLNQIDGAMPRLNAIPKGCAYNPR 300
            +P HPYT GL+ ++P      D  ++       R RLNQI G+MP L+ +P+GC +N R
Sbjct: 244 GEPLHPYTRGLLGALPQCADKADCGLEDVAAPRVRRRLNQIPGSMPSLSDVPRGCPFNNR 303

Query: 301 CPQTFDRCMTERPDL-MPAGSTRAACWLHA 329
           C      C T RP L + +    AAC + A
Sbjct: 304 CELCETVCTTTRPLLEVKSDGRMAACHMVA 333