Pairwise Alignments

Query, 348 a.a., Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) from Acidovorax sp. GW101-3H11

Subject, 358 a.a., oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  322 bits (825), Expect = 9e-93
 Identities = 172/339 (50%), Positives = 225/339 (66%), Gaps = 23/339 (6%)

Query: 14  LLEVKNLVVEFPGRR---GT----LRALDDISFSIAPGEILGVVGESGAGKSLTGAAIIG 66
           LL+V++L VEFPGR    GT    LRA+  ISFSIAPG  L +VGESG GKS+T  A++ 
Sbjct: 17  LLDVRDLSVEFPGRPEADGTPGAPLRAVAGISFSIAPGGTLCLVGESGCGKSMTALALLR 76

Query: 67  LLEPPGRVASGQILLEGQRIDNLSNEEMRHIRGRRIGAIFQDPLTSLNPLYTVGRQLTET 126
           L+  PGRVASG + LEG+ +  L   EMR +RGR I  IFQ+P+TSLNP++ VG Q+ E 
Sbjct: 77  LVPEPGRVASGSVRLEGRELLTLPEPEMRGVRGRSISMIFQEPMTSLNPVFRVGEQIAEG 136

Query: 127 ILAHLPVTPAEARQRAIALLKDTGIPAAEERIDHYPHQFSGGMRQRVVIALALAAEPKLI 186
           +  HL ++ ++A  RA+ LL+  GIP+ E R   +PHQ SGGMRQRV+IA+ALA +P+L+
Sbjct: 137 VRLHLGLSRSDAAARAVDLLRQVGIPSPELRARDFPHQMSGGMRQRVMIAMALACDPRLL 196

Query: 187 VADEPTTALDVSIQAQIITLLKNICKSRGAAVMLITHDMGVIAETCDRVAVLYAGRVAEI 246
           +ADEPTTALDV+IQ QI+ L++++   RGA+V+LITHD+GV+AET D VAV+YAGR+ E 
Sbjct: 197 IADEPTTALDVTIQRQILRLMRDLAAHRGASVLLITHDLGVVAETADHVAVMYAGRIMEH 256

Query: 247 GPVHDVINKPSHPYTSGLMASIPDMTMD--RERLNQIDGAMPRLNAIPKGCAYNPRCPQT 304
             V D   +P HPY  GLM S+P        ERL+ I G +P L A+P GC +  RCP  
Sbjct: 257 ASVGDFFARPLHPYAQGLMRSVPQAVSGPRAERLSAIPGTVPPLWALPSGCTFRDRCPHA 316

Query: 305 FDRCMTERPDL--MPAGSTRAA------------CWLHA 329
           F RC  + P L  MP  +  A             CWLHA
Sbjct: 317 FARCAEQEPPLLAMPPQALAATPTDNAAQAHGVRCWLHA 355