Pairwise Alignments

Query, 348 a.a., Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) from Acidovorax sp. GW101-3H11

Subject, 360 a.a., oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  404 bits (1038), Expect = e-117
 Identities = 199/350 (56%), Positives = 254/350 (72%), Gaps = 16/350 (4%)

Query: 14  LLEVKNLVVEFPGRRGTLRALDDISFSIAPGEILGVVGESGAGKSLTGAAIIGLLEPPGR 73
           +L ++NL V+ P R   LR +D +S+ IAPGEILGVVGESGAGKS+ G A+IGLL PP  
Sbjct: 5   VLSIRNLTVDIPTRYAVLRPVDKVSYDIAPGEILGVVGESGAGKSMAGNAVIGLLTPPAH 64

Query: 74  VASGQILLEGQRIDNLSNEEMRHIRGRRIGAIFQDPLTSLNPLYTVGRQLTETILAHLPV 133
           ++SG++ L G+RID L+ E+MR +RG+ IG +FQDPLTSLNPL  +G QLTET+LAHLP+
Sbjct: 65  ISSGEVWLNGKRIDRLTPEQMRRVRGKDIGMVFQDPLTSLNPLLRIGDQLTETMLAHLPI 124

Query: 134 TPAEARQRAIALLKDTGIPAAEERIDHYPHQFSGGMRQRVVIALALAAEPKLIVADEPTT 193
           + AEA +RA+A L++ GIPAA +R++ YPH+FSGGMRQRVVIALAL AEP L++ADEPTT
Sbjct: 125 SRAEAEERAVAALEEVGIPAARQRVNSYPHEFSGGMRQRVVIALALCAEPSLVIADEPTT 184

Query: 194 ALDVSIQAQIITLLKNICKSRGAAVMLITHDMGVIAETCDRVAVLYAGRVAEIGPVHDVI 253
           ALDVS+QAQII LLK +C+ RG AVMLITHDMGVIAE  DRVAV+YAGR+AE+GPV +V+
Sbjct: 185 ALDVSVQAQIIALLKRLCRERGTAVMLITHDMGVIAEAADRVAVMYAGRLAELGPVREVL 244

Query: 254 NKPSHPYTSGLMASIPDMTMDRERLNQIDGAMPRLNAIPKGCAYNPRCPQTFDRCMTERP 313
             P HPYT GLM S P  +   +RL+QI G+MPRL  +P GCA++PRCP+  D+C  +  
Sbjct: 245 TAPRHPYTFGLMGSTPLASKGLKRLHQIPGSMPRLGRLPPGCAFSPRCPRAQDKCRHDPG 304

Query: 314 DLMPAGSTRAACWL---------------HAGASTTAPTATAATKAGVTA 348
            ++ A    AACW                H GA     T+    + G  A
Sbjct: 305 PVIDADGA-AACWFPMDGTEGIGGDATPPHGGARHLPDTSPTGARPGADA 353