Pairwise Alignments

Query, 452 a.a., NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) from Acidovorax sp. GW101-3H11

Subject, 433 a.a., NADH-quinone oxidoreductase, F subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  422 bits (1084), Expect = e-122
 Identities = 207/399 (51%), Positives = 278/399 (69%), Gaps = 4/399 (1%)

Query: 57  GTDGGEPLTQDQVIATVKESGLRGRGGAGFPTGLKWSFMPRSFPGQK-YLVCNSDEGEPG 115
           GTD    + +D ++  +K+SGLRGRGGAGFPTGLKWSFMP+   G+  YLV N+DE EPG
Sbjct: 31  GTDKLIQMGRDDIVKIMKDSGLRGRGGAGFPTGLKWSFMPKESDGRPHYLVVNADESEPG 90

Query: 116 TCKDRDILQFNPHIVIEGMIIAAYAMGISVGYNYIHGEIFQTYDRFEAALEEARAAGYLG 175
           TCKDR+I++ +PH +IEG +IA++AMG    Y YI GE  +  +  +AA++EA  AG LG
Sbjct: 91  TCKDREIMRHDPHTLIEGCLIASFAMGAHASYIYIRGEYIREREALQAAIDEAYEAGLLG 150

Query: 176 DKILGSNFSFQLHAAHGFGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTIN 235
               GS + F L+  HG GAYICGEETAL+ESLEGKKG PR KPPFPA  GLYG PTT+N
Sbjct: 151 KNAAGSGWDFDLYLTHGAGAYICGEETALIESLEGKKGMPRMKPPFPAGAGLYGCPTTVN 210

Query: 236 NTETFAAVPWIIRNGGAAYLECGKPNNGGTKIFSVSGDVEKPGNYEVPLGTPFAKLLEL- 294
           N E+ A VP I+R G   + + G+PNN GTK+F++SG V +P   E  +   F +L++  
Sbjct: 211 NVESIAVVPTILRRGADWFAQFGRPNNAGTKLFAISGHVNQPCVVEEAMSISFEELIDKH 270

Query: 295 AGGVRKG-RQLKAVIPGGSSAPVLPASIIMECTMDYDSI-AKAGSMLGSGAVIVMDDSRS 352
            GG+R G   LKAVIPGGSS P +    + +  MD+D +  + GS LG+ AVIVMD S  
Sbjct: 271 CGGIRGGWDNLKAVIPGGSSVPCVRGENMRDAIMDFDYLRGELGSGLGTAAVIVMDQSTD 330

Query: 353 MVESLLRLSYFYSHESCGQCTPCREGTGWMWRVIDRIQHGQGRDGDLNLLNSVADNIQGR 412
           +++++ RLS FY HESCGQCTPCREGTGWM RV+DR+  G+    ++++L  V   ++G 
Sbjct: 331 IIKAIWRLSAFYKHESCGQCTPCREGTGWMMRVMDRLVRGEAEVEEIDMLFDVTKQVEGH 390

Query: 413 TICALGDAAAMPVRAMIKHFRPEFEALIRQEKTPQASTS 451
           TICALGDAAA P++ +I++FR E E  I+ +KT + + +
Sbjct: 391 TICALGDAAAWPIQGLIRNFRDEIEDRIKAQKTGRVTAA 429