Pairwise Alignments

Query, 334 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Acidovorax sp. GW101-3H11

Subject, 341 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Dechlorosoma suillum PS

 Score =  189 bits (481), Expect = 7e-53
 Identities = 112/339 (33%), Positives = 193/339 (56%), Gaps = 15/339 (4%)

Query: 4   LKTLLATALVAASLLPAAHAQERTIKFAFQNQKD------HPQAQGAQKFADLVAAKTGG 57
           +K L+A A +A +LLP  H+      +  + +         P  +  +++A+LV  KT G
Sbjct: 1   MKKLVAAASLALALLPLGHSVAHAADYKSEYRLSTVLGPAFPWGKAGERWAELVKQKTEG 60

Query: 58  RIAVKLFPGGTLGGDLQT--VSALQGGTVEMTVLNAGILAAQSKEFGIYDFPFLFATPQE 115
           RI +KL+PG +L G  QT   SA++ G +++ + ++   + Q K+  ++  PFL    + 
Sbjct: 61  RINIKLYPGTSLVGGDQTREFSAIRQGVIDLAIGSSINWSPQVKQLNLFSLPFLTPDEKS 120

Query: 116 ADAVTDGPFGKKLLDKLQAKNLVGLGYWELGFRNLTNSKKPITKAEDIAGLKIRVIQSPI 175
            DA+  GP GK L   L+ + +V L Y E GFR L+NS+ PI    D+ G+KIRV+ SPI
Sbjct: 121 LDALIKGPVGKDLFAVLEKQGVVPLAYGENGFRELSNSRHPIRTPADLKGMKIRVVGSPI 180

Query: 176 YIDLFNALGANAVPMPFPELYTAMEQKAVDGQENPFSTILSSKFAEV-QKYLTVTRHMYN 234
           +ID F+ALGAN   M + +   A+  KAVDGQENP S   ++K   + Q++LT+  +M +
Sbjct: 181 FIDAFSALGANPTQMSWADAQPALATKAVDGQENPLSVFNAAKLHTLGQQHLTLWGYMTD 240

Query: 235 PQAVIVSKKFWDSLNPADQKALTDAMAEA-----TTFQRGVSRVQANVALEDLKKAGMQV 289
           P   +V++  W++ + AD+KA+ +A  +A        ++GVS    +  L+D++K G+ +
Sbjct: 241 PLIFVVNRNVWNNWSEADRKAVREAAEQAAAENLVAARKGVSPGD-DALLKDIEKNGVTI 299

Query: 290 SEFSPAELDKLRAKVKPVVEKHSEKVGAETVQEVYSTLA 328
           +  +  +    +   +PV +K +E VG + V++  + +A
Sbjct: 300 TRLTAEQRKAFKDLTRPVYDKWAETVGKDLVKKAEAAIA 338