Pairwise Alignments

Query, 230 a.a., Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) from Acidovorax sp. GW101-3H11

Subject, 212 a.a., pseudouridylate synthase (RefSeq) from Shewanella amazonensis SB2B

 Score =  228 bits (581), Expect = 7e-65
 Identities = 117/200 (58%), Positives = 143/200 (71%), Gaps = 4/200 (2%)

Query: 18  APPAPMTPRLIRFNKPYGVLSQFTAEGKWQGLKDYIDLPGVYVAGRLDADSEGLLLLTND 77
           AP  P   +L+ FNKP+ VL QFT E   Q LKD+I LPGVY AGRLD DSEGLLLLTND
Sbjct: 14  APRKPAVTQLVLFNKPFDVLCQFTDEAGRQTLKDFIPLPGVYAAGRLDRDSEGLLLLTND 73

Query: 78  GPLQAHIADPRFKMEKTYWVQVEGIPDEAALAALRGGVVLNDGPTLPARARLLEPAPAVW 137
           G LQ+ + +P+ +  KTYWVQVEGIPDE+AL  LR GV L DGPTLPAR R ++ AP +W
Sbjct: 74  GQLQSRLTEPKKQTYKTYWVQVEGIPDESALDKLREGVELKDGPTLPARVRRID-APQIW 132

Query: 138 DRTPPIRERKAIPTAWIELIIREGRNRQVRRMTAAVGHPTLRLIRAAIGPHTLDGLAPGA 197
            R PP+RERK+IP  W+E+ I EGRNRQVRRMTA +G+PTLRL+RAAIG   L  L  G 
Sbjct: 133 PRNPPVRERKSIPDCWLEIQICEGRNRQVRRMTAHIGYPTLRLVRAAIGEIRLGHLGSGE 192

Query: 198 WADA---DVGSYAATAPVRR 214
           +      ++ S + T  ++R
Sbjct: 193 YRKLNRDEISSLSTTLGIKR 212