Pairwise Alignments

Query, 230 a.a., Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) from Acidovorax sp. GW101-3H11

Subject, 269 a.a., ribosomal large subunit pseudouridine synthase E (RefSeq) from Shewanella sp. ANA-3

 Score =  212 bits (540), Expect = 5e-60
 Identities = 110/172 (63%), Positives = 126/172 (73%), Gaps = 1/172 (0%)

Query: 25  PRLIRFNKPYGVLSQFTAEGKWQGLKDYIDLPGVYVAGRLDADSEGLLLLTNDGPLQAHI 84
           P ++ FNKP+ VL QFT E   + LKDYI +PGVY AGRLD DSEGLLLLTNDG LQA +
Sbjct: 88  PMIVLFNKPFDVLCQFTDEQGRKTLKDYIPIPGVYAAGRLDRDSEGLLLLTNDGQLQAKL 147

Query: 85  ADPRFKMEKTYWVQVEGIPDEAALAALRGGVVLNDGPTLPARARLLEPAPAVWDRTPPIR 144
            +P+ K  KTYWVQVEG P +A LA LR GV L DG TLPA+  ++   P VW R PPIR
Sbjct: 148 TEPKKKTFKTYWVQVEGEPTDADLAKLRQGVELKDGITLPAKVSIM-ATPNVWPRNPPIR 206

Query: 145 ERKAIPTAWIELIIREGRNRQVRRMTAAVGHPTLRLIRAAIGPHTLDGLAPG 196
           ERK IPT W+E+ I EGRNRQVRRMTA +G PTLRLIR  IG  +LD LA G
Sbjct: 207 ERKNIPTTWLEIQIHEGRNRQVRRMTAHIGFPTLRLIRYKIGQWSLDDLATG 258