Pairwise Alignments

Query, 268 a.a., Zn-dependent protease with chaperone function from Xanthomonas campestris pv. campestris strain 8004

Subject, 269 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  222 bits (566), Expect = 6e-63
 Identities = 121/258 (46%), Positives = 166/258 (64%), Gaps = 10/258 (3%)

Query: 5   LLIVVAVLALTACATTTSPTGRRQVVGGVTQDQLDKLGAESFAQTKAKEKVSTDGKQNAY 64
           L+++ A L LTACATT SPTGR Q +   +  Q+ ++G  SFA+ K ++K+S + K   Y
Sbjct: 8   LVLMTAALGLTACATTQSPTGRSQTLL-YSSSQMQQMGDASFAEMKKQQKISGNKKLTQY 66

Query: 65  VQCVVNALVAQLPPQWRETRWETALFVDDEANAFALPGGKVGVNTGIFTVAKTQDQLAAV 124
           V CV N + A LP Q +  +W+  LF  ++ NAFALPGG +GV TG+  VA T DQLA V
Sbjct: 67  VNCVANRVTAVLPDQTQ--KWDVVLFDSEQVNAFALPGGHIGVYTGLLKVASTPDQLATV 124

Query: 125 LGHEIGHVISRHHEERITRQLGAQTGLGIIGALAGAAYGDGAASAVN---QVGGMTAQTV 181
           LGHE+ HV+++H  E+++R     TG+G+   +A AA G G  S  +      G+ AQ  
Sbjct: 125 LGHEVAHVLAQHGNEQVSRS--QMTGMGM--QIADAALGAGGVSNRDLYMSALGLGAQVG 180

Query: 182 FLLPGSRTQESEADVVGQRLMAQAGFDPAQAVSLWQNMMAASGNRQPQWLSTHPDPANRI 241
            +LP  R QESEAD++G  LMA+AGFDPAQ+V LWQNM  A G + P+ LSTHP   NRI
Sbjct: 181 VILPFGRAQESEADIMGLELMARAGFDPAQSVVLWQNMSKAGGGKGPELLSTHPSNNNRI 240

Query: 242 RELQADVNALQPVYQQAR 259
            +L+     +QP+YQ A+
Sbjct: 241 AQLEQLQGQMQPLYQSAK 258