Pairwise Alignments

Query, 455 a.a., ATP-dependent hsl protease ATP-binding subunit HslU from Xanthomonas campestris pv. campestris strain 8004

Subject, 453 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Bifidobacterium breve UCC2003

 Score =  101 bits (252), Expect = 4e-26
 Identities = 83/231 (35%), Positives = 109/231 (47%), Gaps = 56/231 (24%)

Query: 259 QHGIVFIDEIDKVAKR-GEAGSSGGDVSREGVQRDLLPLVEGSNVST---------KYGT 308
           QHGI++IDEIDK+A++ GE  S   DVS EGVQ+ LL ++EG+  S          +  T
Sbjct: 205 QHGIIYIDEIDKIARKSGENTSITRDVSGEGVQQALLKILEGTIASVPLEGTRKHKEQDT 264

Query: 309 VKTDH--ILFIASGAF----------------------HLAKPSD--------------- 329
           V+ D   ILFI  GAF                      H A   D               
Sbjct: 265 VQMDTCGILFICGGAFVGLTDIVRKRLGRRETGFGANWHDADLKDEELLKQVNADDLAEF 324

Query: 330 -LIPELQGRFPIRVELTALTKADFVRILTEPKAALIKQYEALLQTEGVALTFGADAVDRL 388
            L+PE  GR P+   L  LT  D   ILT+P  ALIKQY  L   +GV L F   AV  +
Sbjct: 325 GLLPEFIGRLPVTSVLKELTVDDLTEILTQPANALIKQYRKLFAVDGVDLEFTDQAVQAI 384

Query: 389 AEIAAQVNERQENIGARRLHTVLERLLDVLSYEAPD-RDGQSVTVDAAYVD 438
           A+ A      ++ IGAR L +++ER L    ++ P   D + V VD A V+
Sbjct: 385 ADTAI-----KQGIGARGLRSIIERTLQDTMFQLPSLEDVKQVVVDKASVE 430



 Score = 84.0 bits (206), Expect = 9e-21
 Identities = 48/129 (37%), Positives = 70/129 (54%), Gaps = 31/129 (24%)

Query: 11  PREIVQELDRHIVGQHDAKRAVAIALRNRWRR--MQLPEELRN----------------- 51
           P +I   L+R+++GQ +AKRA+++A+ N ++R  M+L E                     
Sbjct: 65  PTQIFDYLNRYVIGQEEAKRALSVAVYNHYKRVNMELQESAEQLDGANGNAALQSAGRAR 124

Query: 52  ------------EVMPKNILMIGPTGVGKTEIARRLATLANAPFVKVEATRFTEVGYVGK 99
                       EV   NIL++GPTGVGKT +A+ LA + N PFV  +AT  TE GYVG 
Sbjct: 125 KSQRANDPLSDVEVAKSNILLLGPTGVGKTYLAQSLARVMNVPFVITDATTLTEAGYVGD 184

Query: 100 DVEQIIRDL 108
           DVE +++ L
Sbjct: 185 DVETVLQRL 193