Pairwise Alignments

Query, 865 a.a., histidine kinase/response regulator hybrid protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 1494 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  141 bits (355), Expect = 3e-37
 Identities = 112/371 (30%), Positives = 165/371 (44%), Gaps = 7/371 (1%)

Query: 480  YSRTQLLGMTFQDVTHPDDLDVDLALLGELLDGKRNSYTLSKRYVSRQGAVLWTLLSVSL 539
            ++  QL G    D  HP+D    L  + + +DG R  Y    R  ++ G  +W      +
Sbjct: 852  HTEQQLNGPVLLDRIHPEDKPRVLHAIEQHIDGSRAFYEAEYRIENKPGHWIWITDRGKV 911

Query: 540  V-RDSDGAPVHFVSQVLDVTEQHVAAERLAESEARLRAISDATPTLVSQFDAAQRCLFAN 598
            V RD  G PV  V    D+T +  A   L  S   L ++++A   +V   D   R    N
Sbjct: 912  VERDKQGKPVRMVGTHKDITSRKNAENELRLSAQVLASMNEAV--VVGGLD--YRIASVN 967

Query: 599  EAHRSWLGVDPNSLVGCHITRLLGDDLGEPVYAALAAAARGERATFDYVLQAGASARDVE 658
             A     G +P  + G H   L  D     +Y A+       +     +       R + 
Sbjct: 968  PAFSLITGFNPEQVQGKHFLFLTHDRKQRHIYEAIEQQLLRNKHWAGELKIRTRDQRAIL 1027

Query: 659  ITL-VPATKGTQAQVQGFFLMAQDVTAHKTLHRLMHERATRDALTGLPNRHAWSEALHTA 717
            I L +     ++A+   F  +  D+T  K     +   A+ D LT LPNR  + + L  A
Sbjct: 1028 IWLEINQVLDSKAEASHFVAVFTDITDRKKAEEDLRLLASYDPLTNLPNRTLFQDRLDHA 1087

Query: 718  VTHAQQQHTAVAVMFLDLDGFKRINDVHGHRAGDAVLVAFGRCLQQAVGTRYLVARLAGD 777
            +  A +    VA++FLDLD FK IND  GH  GD +L A    LQ  V     VARL GD
Sbjct: 1088 LAQAHRTGNMVALLFLDLDRFKHINDSMGHHIGDLLLKAVAHRLQNCVREGDTVARLGGD 1147

Query: 778  EFVVLLDDLHAPERECAAVAERIRNAVAAGTTFGEQWLPIQPSIGVAWQRGSTADTASLM 837
            EF ++L+ + A  +    +AE++  A        +Q L I PSIG++      +D+ SL+
Sbjct: 1148 EFTIILEGV-AKTKAATVIAEKLIRAFQTPFILEDQALNISPSIGISLYPMDASDSTSLV 1206

Query: 838  HAADEAMYAAK 848
              AD AMY AK
Sbjct: 1207 KYADTAMYHAK 1217