Pairwise Alignments

Query, 865 a.a., histidine kinase/response regulator hybrid protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 1301 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation (NCBI) from Rhodospirillum rubrum S1H

 Score =  174 bits (441), Expect = 3e-47
 Identities = 130/412 (31%), Positives = 198/412 (48%), Gaps = 41/412 (9%)

Query: 396 LLRKDGSQRRVRLSFNVIQD---AQQGLTGYLAMAIDVTAE-LQAQAAAQLAAKRFSGAF 451
           L  K     R R+   V+QD           LA A  + A+  + Q   + +  RF   F
Sbjct: 574 LTAKADEAMRARMLRGVVQDYLFKPFSRLELLARADGLIADHRRKQMVLRESEARFRATF 633

Query: 452 DTAPQGMAIVSLEGRWSEINSALCTLLGYSRTQLLGMTFQDVTHPDDLDVDLALLGELLD 511
           + A  G+A +  +G W  +N  LC ++GY   +LL ++FQD+THPDDL  DL  +  LL 
Sbjct: 634 EQAAVGIAHLDPDGHWLRVNHKLCDIVGYPPDELLTLSFQDITHPDDLRADLRQMEALLA 693

Query: 512 GKRNSYTLSKRYVSRQGAVLWTLLSVSLVRDSDGAPVHFVSQVLDVTEQHVAAERLAESE 571
           G+ ++YT+ KRY+ + G  LW  L+VSLVRD   AP +F+S V     +++ + + AE +
Sbjct: 694 GQIDTYTIEKRYIRKTGESLWINLTVSLVRDIHNAPAYFISVV-----ENIQSRKEAELQ 748

Query: 572 ARLRAISDATPTLVSQFDAAQRCLFANEAHRSWLGVDP--NSLVGCHITRLLGDDLGEPV 629
             L +         + F  +   +F  +   S L V+P  + +       +LG +     
Sbjct: 749 LLLAS---------AVFSNSMEGIFVTDLKGSILAVNPAFSQITLYEAAEVLGRN----- 794

Query: 630 YAALAAAARGER----ATFDYVLQAGA-------SARDVEI----TLVPATKGTQAQVQG 674
            A +  + R  R    A +  VL  G+         RD E+      + + +  Q +V  
Sbjct: 795 -ARILQSGRQNREFYVALWQDVLTIGSWRGEIWNRRRDGEVFPEWLSISSVRNHQGEVTN 853

Query: 675 FFLMAQDVTAHKTLHRLMHERATRDALTGLPNRHAWSEALHTAVTHAQQQHTAVAVMFLD 734
           +  +  D++  K      H  A  D LTGLPNR      L  A+  A++     AV+FLD
Sbjct: 854 YIGIFSDLSRIKHSEAKFHHLAHHDPLTGLPNRLLLRSRLDHAIERARRTGGRCAVLFLD 913

Query: 735 LDGFKRINDVHGHRAGDAVLVAFGRCLQQAVGTRYLVARLAGDEFVVLLDDL 786
           LD FK IND  GHRAGD +L   G  L   +G    +ARL GDEFV +++D+
Sbjct: 914 LDRFKMINDSLGHRAGDTLLRTLGARLTACLGDTGTLARLGGDEFVAVIEDI 965



 Score = 29.3 bits (64), Expect = 0.002
 Identities = 37/159 (23%), Positives = 63/159 (39%), Gaps = 15/159 (9%)

Query: 280 HGVALGAVCVMHDITQLKDASAALAAERARLQALVDASRDVAIIVFDPLGHIEVFNPGAE 339
           H      + V+ +I   K+A   L      L + V ++    I V D  G I   NP   
Sbjct: 726 HNAPAYFISVVENIQSRKEAELQLL-----LASAVFSNSMEGIFVTDLKGSILAVNPAFS 780

Query: 340 RLLGYTAAEVMGQCPTQFHLPEELARHRATLAVPAPSYVALAAAAAGDLLEQEVWTLLRK 399
           ++  Y AAEV+G+         +  R      V     V    +  G     E+W   R+
Sbjct: 781 QITLYEAAEVLGRNARIL----QSGRQNREFYVALWQDVLTIGSWRG-----EIWN-RRR 830

Query: 400 DGSQRRVRLSFNVIQDAQQGLTGYLAMAIDVTAELQAQA 438
           DG      LS + +++ Q  +T Y+ +  D++    ++A
Sbjct: 831 DGEVFPEWLSISSVRNHQGEVTNYIGIFSDLSRIKHSEA 869