Pairwise Alignments

Query, 865 a.a., histidine kinase/response regulator hybrid protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 322 a.a., diguanylate cyclase with GAF sensor (RefSeq) from Shewanella sp. ANA-3

 Score =  130 bits (327), Expect = 1e-34
 Identities = 65/154 (42%), Positives = 90/154 (58%)

Query: 9   PIPANDALRVDAVRRLGVLDTAAEAEFDDLAWLAAHISGSPMALISLLDADRQWFKARCG 68
           P+P N+  R+  +R L VLDT AE  FD +  L   I   P+ L++L+DA+RQWFK+R G
Sbjct: 5   PVPENELQRLATLRALNVLDTDAEERFDRITRLTRRIFSLPICLVTLVDANRQWFKSRQG 64

Query: 69  TDLEGTPRSVSFCSYTVMGTDLLEVPDAIADPRFTHNPLVTAAPGIRSYVGVPLIGREGY 128
            ++E TPR +S C++ +    +  V DA+ DPRF  NPLVT  P IR YVG PL  +  Y
Sbjct: 65  IEVEQTPRDISLCAHAINHDGIFVVHDALKDPRFCDNPLVTEPPHIRFYVGYPLTIQGEY 124

Query: 129 AYGTLCMLSTRPRVLDENQKQALIRLARQAVNQL 162
             GTLC++   PR   E   + L  L +    +L
Sbjct: 125 RVGTLCLIGNEPRDFTEEDAETLTDLGQMVEAEL 158



 Score = 81.3 bits (199), Expect = 8e-20
 Identities = 53/153 (34%), Positives = 74/153 (48%), Gaps = 4/153 (2%)

Query: 697 TRDALTGLPNRHAWSEALHTAVTHAQQQHTAVAVMFLDLDGFKRINDVHGHRAGDAVLVA 756
           T D LT + NR  +    + ++   ++     A++F DLD FK +ND  GHR GD +L  
Sbjct: 165 TLDPLTMISNRRGFELLAYQSLASCRRTDAEAALVFFDLDFFKEVNDSFGHRKGDQLLYD 224

Query: 757 FGRCLQQAVGTRYLVARLAGDEFVVLLDDLHAPERECAAVAERIRNAVAAGTTFGEQWLP 816
           F   L  A     ++ARL GDEFVVLL  +   ER+    A      +           P
Sbjct: 225 FAHILMAAFRESDVIARLGGDEFVVLLSFI---ERDTVNFAIERFKLLLGEYNQQHSEHP 281

Query: 817 IQPSIGVA-WQRGSTADTASLMHAADEAMYAAK 848
           ++ SIG+A W   S  +   L+ AAD AMY  K
Sbjct: 282 LETSIGIAHWSPASDMNLDDLLDAADRAMYRDK 314