Pairwise Alignments

Query, 169 a.a., RNA polymerase sigma factor from Xanthomonas campestris pv. campestris strain 8004

Subject, 162 a.a., FIG006045: Sigma factor, ECF subfamily from Pseudomonas fluorescens FW300-N2E2

 Score =  154 bits (388), Expect = 9e-43
 Identities = 79/156 (50%), Positives = 107/156 (68%)

Query: 12  VERLYTDHHGWLQGWLRRKLGDGCVAADLAQDTFISVIDAGAADQIREPRPFLATIARRL 71
           VE LY  HH WL  WLRRKLG    AADL QDTF+ V+       I EPR FL TIA+R+
Sbjct: 7   VEVLYNAHHSWLNSWLRRKLGCPDSAADLTQDTFMRVLTTRDPQPILEPRAFLTTIAKRV 66

Query: 72  MAHRQRRKLLEASYLEMLATLPEELAPSPELHLLALEAVQQLDQALDGLPPKVKEAFLLA 131
           + +  RR+ LE +YL+ LA LPE++APS E   + L+ + +LDQ LDGLP  VK+AFLLA
Sbjct: 67  LFNHYRRQDLERAYLDTLAQLPEQVAPSEEERAIILQTLTELDQLLDGLPRAVKQAFLLA 126

Query: 132 HLHELSYAQIAQRLGVSSSSVKQYLTRANRQCLFAV 167
            +  L+Y +IA+ LG+S ++VK++L +A  +C FA+
Sbjct: 127 QVDGLTYNEIARELGISLATVKRHLNKAAMRCYFAL 162