Pairwise Alignments

Query, 814 a.a., DNA gyrase subunit B (EC 5.99.1.3) from Xanthomonas campestris pv. campestris strain 8004

Subject, 805 a.a., DNA gyrase subunit B from Vibrio cholerae E7946 ATCC 55056

 Score =  988 bits (2555), Expect = 0.0
 Identities = 503/805 (62%), Positives = 621/805 (77%), Gaps = 3/805 (0%)

Query: 12  NGTYDSSKITVLRGLEAVRKRPGMYIGDVHDGTGLHHMVFEVVDNSVDEALAGHADDIVV 71
           +  YDSS I VL+GL+AVRKRPGMYIGD  DGTGLHHMVFEVVDNS+DEALAG+  DIVV
Sbjct: 2   SNNYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCKDIVV 61

Query: 72  KIHVDGSVAVSDNGRGVPVDIHKEEGVSAAEVILTVLHAGGKFDDNSYKVSGGLHGVGVS 131
            IH D SV+VSD+GRG+P ++H EE VSAAEVI+TVLHAGGKFDDNSYKVSGGLHGVGVS
Sbjct: 62  TIHEDNSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 121

Query: 132 VVNALSEHLWLDIWRDGFHYQQEYALGEPQYPLKQLEASTKRGTTLRFKPAVEIFSDVEF 191
           VVNALSE + L I+R G  + Q Y  G PQ PL  +  + + GTT+RF P+ + F+++EF
Sbjct: 122 VVNALSEKVLLTIYRGGKIHSQTYHHGVPQAPLAVVGETERTGTTVRFWPSAQTFTNIEF 181

Query: 192 HYDILARRLRELSFLNSGVKIALIDERGEGRRDDFHYEGGIRSFVEHLAQLKTPLHPNVI 251
           HYDILA+RLRELSFLNSGV I L DER E ++D F YEGGI++FV HL + KTP+H  V 
Sbjct: 182 HYDILAKRLRELSFLNSGVSIKLTDEREEDKKDHFMYEGGIQAFVTHLNRNKTPIHEKVF 241

Query: 252 SVTGEH-NGIVVDVALQWTDAYQETMYCFTNNIPQKDGGTHLAGFRGALTRVLSNYIEQN 310
               E  +GI V+VA+QW D +QE +YCFTNNIPQ+DGGTHLAGFRGALTR L+NY+++ 
Sbjct: 242 HFNQEREDGISVEVAMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRGALTRTLNNYMDKE 301

Query: 311 GIAKQAKITLTGDDMREGMIAVLSVKVPDPSFSSQTKEKLVSSDVRPAVENAFGARLQEF 370
           G +K+A+   +GDD REG+ AV+SVKVPDP FSSQTK+KLVSS+V+ AVE+A   +L +F
Sbjct: 302 GFSKKAQAATSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESAMNEKLADF 361

Query: 371 LQENPNEAKAITGKIVDAARAREAARKARDLTRRKGALDIAGLPGKLADCQEKDPALSEL 430
           L ENP+EAK +  KI+DAARAREAARKAR++TRRKGALD+AGLPGKLADCQEKDPALSEL
Sbjct: 362 LAENPSEAKNVCSKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQEKDPALSEL 421

Query: 431 FIVEGDSAGGSAKQGRNRKNQAVLPLRGKILNVERARFDRMLASDQVGTLITALGTGIGR 490
           +IVEGDSAGGSAKQGRNRKNQA+LPL+GKILNVE+ARFD+ML+S +V TLITALG GIGR
Sbjct: 422 YIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR 481

Query: 491 DEYNPDKLRYHRIILMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIGLPPLYKLKQG 550
           DEYNPDKLRYH II+MTDADVDGSHIRTLLLTFFYRQMPELIERGYIYI  PPLYK+K+G
Sbjct: 482 DEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIAQPPLYKVKKG 541

Query: 551 KSELYLKDDAALNAYLASSAVEGAALIPASDEPPITGEALEKLLLLFAGAKEAIARNAHR 610
           K E Y+KD+ A+N Y  + A++GA L   +D P + GE LEKL+  +  A + + R + R
Sbjct: 542 KQEQYIKDEEAMNQYQVALAMDGAELHVNADAPALAGEPLEKLVQQYNAAIKLVERMSRR 601

Query: 611 YDPALLTALIDLPPLDVVQLQAEGDVHPTLDALQAVLNRGTLGTARYHLRFDPATD-SAA 669
           Y  A+L  LI +P ++      +  V      L   LN   +G ++Y +  +   + +  
Sbjct: 602 YPYAMLHELIYVPRINAELCADKAAVEAWTQRLVEQLNAKEVGASQYSVLVEHNAELNVY 661

Query: 670 ASLVSVRKHMGEEFTQVLPMGAFESGELRPLREVALALHGLVREGAQILRGNKSHPITSF 729
              + VR H G     +L      S E   L +++ AL GL+  GA I RG +  PI+SF
Sbjct: 662 LPKIQVRTH-GVTHEYLLSADLINSKEYAKLADLSEALDGLIEAGAFIKRGERVQPISSF 720

Query: 730 AQAQAWLLEEAKRGRQVQRFKGLGEMNAEQLWETTVNPDTRRLLQVRIEDAVAADQIFST 789
           A A  WL++E++RG  +QR+KGLGEMN +QLWETT++P+TRR++QV IEDAV AD++F+T
Sbjct: 721 AAALDWLIKESRRGLSIQRYKGLGEMNPDQLWETTMDPETRRMMQVTIEDAVGADELFTT 780

Query: 790 LMGDVVEPRRDFIEDNALKVSNLDI 814
           LMGD VEPRR FIE NALKV+NLD+
Sbjct: 781 LMGDQVEPRRAFIETNALKVANLDV 805