Pairwise Alignments

Query, 814 a.a., DNA gyrase subunit B (EC 5.99.1.3) from Xanthomonas campestris pv. campestris strain 8004

Subject, 811 a.a., DNA gyrase subunit B from Sinorhizobium meliloti 1021

 Score =  842 bits (2174), Expect = 0.0
 Identities = 451/816 (55%), Positives = 581/816 (71%), Gaps = 7/816 (0%)

Query: 1   MTDEQTTPPTPNGTYDSSKITVLRGLEAVRKRPGMYIGDVHDGTGLHHMVFEVVDNSVDE 60
           MTD   T       Y +  I VL+GL+AVRKRPGMYIGD  DG+GLHHMV+EVVDN++DE
Sbjct: 1   MTDISETEAGAIAEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDE 60

Query: 61  ALAGHADDIVVKIHVDGSVAVSDNGRGVPVDIHKEEGVSAAEVILTVLHAGGKFDDNSYK 120
           ALAGHAD + V ++ DGSV V+DNGRG+P DIH+EEGVSAAEVI+T LHAGGKFD NSYK
Sbjct: 61  ALAGHADIVTVTLNPDGSVTVTDNGRGIPTDIHREEGVSAAEVIMTQLHAGGKFDQNSYK 120

Query: 121 VSGGLHGVGVSVVNALSEHLWLDIWRDGFHYQQEYALGEPQYPLKQL-EASTKRGTTLRF 179
           VSGGLHGVGVSVVNALS  L L I R G  ++  +  G    PLK   +A  + GT + F
Sbjct: 121 VSGGLHGVGVSVVNALSVSLKLKIRRAGKIHEMSFTHGVADGPLKVTGDAGGETGTEVTF 180

Query: 180 KPAVEIFSDVEFHYDILARRLRELSFLNSGVKIALIDER-GEGRRDDFHYEGGIRSFVEH 238
            P+ + FS++EF +  L  RLREL+FLNSGV+I L D+R  + RR++  Y+GG+ +FV +
Sbjct: 181 TPSEQTFSNIEFEFGTLEHRLRELAFLNSGVRIVLTDKRHSDIRREEMMYDGGLEAFVAY 240

Query: 239 LAQLKTPLHPNVISVTGEHNGIVVDVALQWTDAYQETMYCFTNNIPQKDGGTHLAGFRGA 298
           L + K PL    +S+ GE +GI V+VA+ W D+Y E + CFTNNIPQ+DGGTH+AGFRGA
Sbjct: 241 LDRAKKPLVQKPVSIRGEKDGITVEVAMWWNDSYHENVLCFTNNIPQRDGGTHMAGFRGA 300

Query: 299 LTRVLSNYIEQNGIAKQAKITLTGDDMREGMIAVLSVKVPDPSFSSQTKEKLVSSDVRPA 358
           LTR +++Y + +GI K+ K++LTGDD REG+ AVLSVKVPDP FSSQTK+KLVSS+VRP 
Sbjct: 301 LTRQITSYADTSGITKKEKVSLTGDDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEVRPV 360

Query: 359 VENAFGARLQEFLQENPNEAKAITGKIVDAARAREAARKARDLTRRKGALDIAGLPGKLA 418
           VE+     L  +L+E+P++AK + GK+V+AA AREAARKAR+LTRRKGALDI+ LPGKLA
Sbjct: 361 VESLVNEALSVWLEEHPSDAKILVGKVVEAAAAREAARKARELTRRKGALDISSLPGKLA 420

Query: 419 DCQEKDPALSELFIVEGDSAGGSAKQGRNRKNQAVLPLRGKILNVERARFDRMLASDQVG 478
           DC E+DPA SELF+VEGDSAGGSAKQGR+R+NQA+LPLRGKILNVERARFD+ML+S ++G
Sbjct: 421 DCSERDPAKSELFLVEGDSAGGSAKQGRSRENQAILPLRGKILNVERARFDKMLSSQEIG 480

Query: 479 TLITALGTGIGRDEYNPDKLRYHRIILMTDADVDGSHIRTLLLTFFYRQMPELIERGYIY 538
           TLITALGT IG+DE+N DKLRYH+II+MTDADVDG+HIRTLLLTFF+RQMPELIERG++Y
Sbjct: 481 TLITALGTSIGKDEFNADKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPELIERGHLY 540

Query: 539 IGLPPLYKLKQGKSELYLKDDAALNAYLASSAVEGAALIPASDEPPITGEALEKLLLLFA 598
           I  PPLYK+ +GKS  YLKD+ AL  YL S  +E A+L  AS E  + G+ L +++    
Sbjct: 541 IAQPPLYKVARGKSVQYLKDEKALEDYLISMGLEEASLELASGEVRV-GQDLREVINDAL 599

Query: 599 GAKEAIARNAHRYDPALLTALIDLPPLDVVQLQAEGDVHPTLDALQAVLNRGTLGTARYH 658
             +  +     RY+ +++        L+ V+L  E D +     + A + R     A   
Sbjct: 600 RLRSLMEGLHSRYNRSVVEQAAIAGALN-VELNGERDEY---QLIAAEVARRLDVIAEET 655

Query: 659 LRFDPATDSAAASLVSVRKHMGEEFTQVLPMGAFESGELRPLREVALALHGLVREGAQIL 718
            R   A  +A   L   R   G +   VL M    S + R + ++   L  +      + 
Sbjct: 656 ERGWEAAVTAEGGLKLERMVRGVKEAAVLDMALIGSSDARHIDQLKARLKEVYGAPPVLR 715

Query: 719 RGNKSHPITSFAQAQAWLLEEAKRGRQVQRFKGLGEMNAEQLWETTVNPDTRRLLQVRIE 778
           R + +  I+        +    ++G  +QR+KGLGEMNAEQLWETT++P+ R LLQV++ 
Sbjct: 716 RRDGTQEISGPRALLDAIFAAGRKGLTMQRYKGLGEMNAEQLWETTLDPNVRSLLQVKVT 775

Query: 779 DAVAADQIFSTLMGDVVEPRRDFIEDNALKVSNLDI 814
           DA  AD +FS LMGD VEPRRDFI++NAL V+NLDI
Sbjct: 776 DATDADGLFSRLMGDEVEPRRDFIQENALSVANLDI 811