Pairwise Alignments

Query, 814 a.a., DNA gyrase subunit B (EC 5.99.1.3) from Xanthomonas campestris pv. campestris strain 8004

Subject, 805 a.a., DNA gyrase subunit GyrB from Phaeobacter inhibens DSM 17395

 Score =  841 bits (2172), Expect = 0.0
 Identities = 451/806 (55%), Positives = 570/806 (70%), Gaps = 19/806 (2%)

Query: 15  YDSSKITVLRGLEAVRKRPGMYIGDVHDGTGLHHMVFEVVDNSVDEALAGHADDIVVKIH 74
           Y +  I VL+GLEAVRKRPGMYIGD  DG+GLHHMV+EVVDN +DEALAGHAD +VVKIH
Sbjct: 11  YGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAGHADRVVVKIH 70

Query: 75  VDGSVAVSDNGRGVPVDIHKEEGVSAAEVILTVLHAGGKFDDNSYKVSGGLHGVGVSVVN 134
            D SV+V+DNGRG+PV IH+EEGVSAAEVI+T LHAGGKFD NSYKVSGGLHGVGVSVVN
Sbjct: 71  ADSSVSVNDNGRGIPVGIHEEEGVSAAEVIMTQLHAGGKFDSNSYKVSGGLHGVGVSVVN 130

Query: 135 ALSEHLWLDIWRDGFHYQQEYALGEPQYPLKQL-EASTKRGTTLRFKPAVEIFSDVEFHY 193
           ALS+ L L IWRDG  +   +  G+    LK + +   + GT +RF  + + FS++E+ +
Sbjct: 131 ALSDWLELRIWRDGKEHVARFERGDTAEHLKVVGDCGDQTGTEVRFLASTDTFSNLEYLF 190

Query: 194 DILARRLRELSFLNSGVKIALIDERGEGRRD-DFHYEGGIRSFVEHLAQLKTPLHPNVIS 252
           + L +RLREL+FLNSGV+I LIDER   R + +  YEGG++ FV++L + K+P+    I 
Sbjct: 191 ETLEKRLRELAFLNSGVRIILIDERPAERLEVELFYEGGVKEFVKYLDRSKSPVMEAPIY 250

Query: 253 VTGEHNGIVVDVALQWTDAYQETMYCFTNNIPQKDGGTHLAGFRGALTRVLSNYIEQNGI 312
           +TG+ + I V+VA+ W D+Y ET+  FTNNIPQ+DGGTH+AGFRGALTR ++NY + +GI
Sbjct: 251 ITGDRDEIGVEVAMWWNDSYHETVLPFTNNIPQRDGGTHVAGFRGALTRTINNYAQSSGI 310

Query: 313 AKQAKITLTGDDMREGMIAVLSVKVPDPSFSSQTKEKLVSSDVRPAVENAFGARLQEFLQ 372
           AK+ K++ TGDD REG+  VLSVKVPDP FSSQTK+KLVSS+VRP VE+    +L E+ +
Sbjct: 311 AKKEKVSFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPVVESLVNEKLAEWFE 370

Query: 373 ENPNEAKAITGKIVDAARAREAARKARDLTRRKGALDIAGLPGKLADCQEKDPALSELFI 432
           ENPN+AK I GKI++AA AREAARKAR+LTRRK A+D+  L GKL DC EKDP+ +E+F+
Sbjct: 371 ENPNQAKQIVGKIIEAALAREAARKARELTRRKTAMDVNYLAGKLKDCSEKDPSKTEVFL 430

Query: 433 VEGDSAGGSAKQGRNRKNQAVLPLRGKILNVERARFDRMLASDQVGTLITALGTGIGRDE 492
           VEGDSAGGSA+ GR+R  QA+LPLRGKILNVERARFDRML S ++G L+ ALGTGIGRDE
Sbjct: 431 VEGDSAGGSAQTGRDRMTQAILPLRGKILNVERARFDRMLGSQEIGNLVMALGTGIGRDE 490

Query: 493 YNPDKLRYHRIILMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIGLPPLYKLKQGKS 552
           +N DKLRYH+I++MTDADVDG+HIRTLLLTFFYRQMPELIE GY+YI  PPLYK+ +GKS
Sbjct: 491 FNIDKLRYHKIVIMTDADVDGAHIRTLLLTFFYRQMPELIEGGYLYIAQPPLYKVSRGKS 550

Query: 553 ELYLKDDAALNAYLASSAVEGAALIPASDEPPITGEALEKLLLLFAGAKEAIARNAHRYD 612
           E+YLKD AAL+ YL +  V+GA L   S E  + G+ L +++      K  +      Y 
Sbjct: 551 EVYLKDQAALDEYLINQGVDGAVLKLGSGE-ELVGQDLARVVDEARQLKRVLDAFPTHYP 609

Query: 613 PALL----TALIDLPPLDVVQLQAEGD-VHPTLDALQAVLNRGTLGTARYHLRFDPATDS 667
             +L     A   +P      LQ   D V   LD +     RG  G           T  
Sbjct: 610 RHILEQAAVAGAFVPGAVDADLQGVADKVAQRLDLIALEYERGWRGR---------ITQD 660

Query: 668 AAASLVSVRKHMGEEFTQVLPMGAFESGELRPLREVALALHGLVREGAQILRGNKSHPIT 727
               L  + + + E  T   PM    SGE R       +L       A ++R ++S  I 
Sbjct: 661 HGIRLSRILRGVEELRTLDGPM--LRSGEARKTGSFTNSLQETYGATATLVRRDRSQAIH 718

Query: 728 SFAQAQAWLLEEAKRGRQVQRFKGLGEMNAEQLWETTVNPDTRRLLQVRIEDAVAADQIF 787
                   +LEE ++G  +QR+KGLGEMN +QLWETT++PD R LLQVR+ED V AD +F
Sbjct: 719 GPLGLLKAILEEGEKGLALQRYKGLGEMNPDQLWETTLDPDARTLLQVRVEDMVEADDLF 778

Query: 788 STLMGDVVEPRRDFIEDNALKVSNLD 813
           + LMGDVVEPRR+FI+ NAL V NLD
Sbjct: 779 TKLMGDVVEPRREFIQKNALSVENLD 804