Pairwise Alignments

Query, 814 a.a., DNA gyrase subunit B (EC 5.99.1.3) from Xanthomonas campestris pv. campestris strain 8004

Subject, 805 a.a., DNA gyrase subunit B (RefSeq) from Shewanella sp. ANA-3

 Score =  966 bits (2496), Expect = 0.0
 Identities = 494/806 (61%), Positives = 616/806 (76%), Gaps = 10/806 (1%)

Query: 14  TYDSSKITVLRGLEAVRKRPGMYIGDVHDGTGLHHMVFEVVDNSVDEALAGHADDIVVKI 73
           +YDSS I VL+GL+AVRKRPGMYIGD  DGTGLHHMVFEVVDNS+DEALAGH  DI + I
Sbjct: 5   SYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCTDITITI 64

Query: 74  HVDGSVAVSDNGRGVPVDIHKEEGVSAAEVILTVLHAGGKFDDNSYKVSGGLHGVGVSVV 133
           HVDGSV+V D+GRG+PV IH EEGVSAAEVI+TVLHAGGKFDDNSYKVSGGLHGVGVSVV
Sbjct: 65  HVDGSVSVRDDGRGIPVAIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVV 124

Query: 134 NALSEHLWLDIWRDGFHYQQEYALGEPQYPLKQLEASTKRGTTLRFKPAVEIFSDVEFHY 193
           NALS+ L L I R+G  ++Q Y  G P  P+K +  +TK GT +RF P+ E FSDVEFH+
Sbjct: 125 NALSKKLQLTIRREGKVHEQFYTHGVPDEPIKVIGDATKTGTEIRFWPSEETFSDVEFHF 184

Query: 194 DILARRLRELSFLNSGVKIALIDERGEGRRDDFHYEGGIRSFVEHLAQLKTPLHPNVISV 253
           +ILA+R+RELSFLNSGV I L+DER + + + F YEGGI +FV++L + KTP++ +V   
Sbjct: 185 EILAKRVRELSFLNSGVGIRLVDER-DNKNEFFKYEGGISAFVDYLNRNKTPVNKDVFHF 243

Query: 254 TGEHN-GIVVDVALQWTDAYQETMYCFTNNIPQKDGGTHLAGFRGALTRVLSNYIEQNGI 312
             E + GI V+VA+QW D YQE+++CFTNNIPQ+DGGTHLAGFR ALTR L+NY+E  G 
Sbjct: 244 MQERDDGITVEVAMQWNDGYQESIFCFTNNIPQRDGGTHLAGFRSALTRNLNNYMENEGY 303

Query: 313 AKQAKITLTGDDMREGMIAVLSVKVPDPSFSSQTKEKLVSSDVRPAVENAFGARLQEFLQ 372
            K+ K   TGDD REG+ AV+SVKVPDP FSSQTK+KLVSS+V+ AVE   G +L ++L 
Sbjct: 304 NKKGKTNATGDDAREGLTAVISVKVPDPKFSSQTKDKLVSSEVKAAVEQTMGEKLNDYLL 363

Query: 373 ENPNEAKAITGKIVDAARAREAARKARDLTRRKGALDIAGLPGKLADCQEKDPALSELFI 432
           ENP +AK I GKIVDAARAREAARKAR++TRRKGALD+ GLPGKLADCQEKDP LSE++I
Sbjct: 364 ENPADAKLIVGKIVDAARAREAARKAREMTRRKGALDLGGLPGKLADCQEKDPGLSEIYI 423

Query: 433 VEGDSAGGSAKQGRNRKNQAVLPLRGKILNVERARFDRMLASDQVGTLITALGTGIGRDE 492
           VEGDSAGGSAKQGRNRKNQA+LPL+GKILNVE+ARFD+ML+S +V TLITALG GIGRDE
Sbjct: 424 VEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRDE 483

Query: 493 YNPDKLRYHRIILMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIGLPPLYKLKQGKS 552
           YNPDK RYH II+MTDADVDGSHIRTLLLTFF+RQMPELIERGY+YI  PPL+K+K+GK 
Sbjct: 484 YNPDKTRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYVYIAQPPLFKVKKGKQ 543

Query: 553 ELYLKDDAALNAYLASSAVEGAALIPASDEPPITGEALEKLLLLFAGAKEAIARNAHRYD 612
           E YLKD+AAL  YL + A++G ++ P+   P ++GE LE+L+  +   +  +AR   RY 
Sbjct: 544 EQYLKDEAALTQYLTTQALDGTSIYPSQGAPGMSGEPLERLVTQYREVEAIVARLEQRYP 603

Query: 613 PALLTALIDLPPLDVVQLQAEGDVHPTLDA----LQAVLNRGTLGTARYHLRFDPATDSA 668
             +   ++  P ++   L  EG +   +DA    L  + N G L +    L  DP     
Sbjct: 604 TQITNRMLYHPMINNEMLADEGKMKECIDAFIHELVELENSGVLYSGEPVL--DPER-KV 660

Query: 669 AASLVSVRKHMGEEFTQVLPMGAFESGELRPLREVALALHGLVREGAQILRGNKSHPITS 728
               +++RKH G +   +     F+S + + + ++  AL GL+  G  + RG++   + S
Sbjct: 661 YLPKITIRKH-GIDTHYLFSYDFFQSTDYQRIGKLGAALEGLIEVGGYVQRGDRVKEVGS 719

Query: 729 FAQAQAWLLEEAKRGRQVQRFKGLGEMNAEQLWETTVNPDTRRLLQVRIEDAVAADQIFS 788
           F +A  W + EAKRG  +QR+KGLGEMN EQLWETT++P++RR+LQV I+DAV ADQ+F+
Sbjct: 720 FIEALDWTIGEAKRGLYIQRYKGLGEMNPEQLWETTMDPESRRMLQVTIDDAVGADQLFT 779

Query: 789 TLMGDVVEPRRDFIEDNALKVSNLDI 814
            LMGD VEPRRDFIE NAL V+NLD+
Sbjct: 780 CLMGDQVEPRRDFIEANALNVANLDV 805